Vigna angularis (adzuki bean): 108337945
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Entry
108337945 CDS
T04660
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16 isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108337945
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Other 90S particles
108337945
Pre-60S particles
Other pre-60S particles
108337945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
MIOS_WD40
WD_LRWD1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
108337945
NCBI-ProteinID:
XP_017430018
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All DBs
Position
7:18560995..18565283
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AA seq
477 aa
AA seq
DB search
MISAISWVPKGVSKSEPIVADPPPEEEIQELIANHKNASSDDSDNDDANDEVVAQALTVA
NAVGKASTGNTDDITIALKDLNMDNYDDEEEGVELFSSGIGDLYYPSNDMDPYIKDKNDD
DSDDLEDMVINPTDSIIVFACNEDDVSHIEVCVLEDAHSNERNLYSHHNILIPAFPLCTA
WLDCPLKGGERGNFIAVGSMEPSIEIWDLDVIDAVQPCVVLGGLEEKKKKGKKKSMKYKK
DSHTDSVLGLAWNKEYRNILASASADMNVKIWDLVTGKCENTLDHHKNKVQAVAWNHHAP
QVLLSGSFDRTVALRDARMPKHSGYSWSVSAEVESLAWDPHTEHYFVVSLDDGIVKGFDI
RKAKPDSSPDESPTFTLHAHDKPVSSVSYNPSAPNLLATGSMDKTVKLWDLSNNQPSFVA
SNSPKAGAIFKISFSEDDPFLLAIGGSKGKLQLWDTLSDSGVARRYGSYKNRSPSGS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgatttcgtgggtgccgaaaggggtttcgaagtcggagcctatcgtcgcc
gatcctcctccggaagaggaaattcaagaactcatcgccaaccacaaaaacgcaagtagt
gatgacagtgacaacgatgacgccaacgatgaagtagtggcgcaagcattaacagtggcg
aatgcagttggtaaagcatccaccggaaacactgacgatataacgattgccttaaaggac
cttaacatggacaattacgatgacgaagaagaaggagttgagttattcagttccggaatt
ggtgatctttattatccgagtaacgacatggatccttatatcaaagataaaaacgatgat
gattccgatgatcttgaagacatggttattaatccgactgattctatcattgtttttgca
tgtaatgaagatgatgtgagtcatattgaggtttgtgtactcgaggatgcacattccaat
gaaaggaacttgtattctcaccataacatccttattcctgcgtttccactctgcacagct
tggctcgattgccctcttaaaggaggagaaagagggaacttcatagctgtgggttcaatg
gaaccctccatagaaatttgggaccttgacgttattgatgcggtgcagccatgtgtggtt
ttgggtggactcgaagagaaaaagaaaaagggaaaaaagaaatcaatgaaatacaaaaag
gacagtcacactgactcggtactgggtcttgcttggaacaaggagtacaggaatatacta
gcaagtgccagtgctgacatgaacgtaaagatttgggatttggttactgggaagtgtgaa
aacacactggatcatcacaagaacaaggttcaagcagttgcttggaatcatcatgcaccg
caggttcttcttagtggttcgtttgatcgtactgtagccttgagggatgcaaggatgcca
aaacattctggctattcgtggtcagtctcagctgaagtagagagcttggcatgggatccg
cacaccgaacactattttgtggtgagtcttgacgatggtattgtcaagggttttgatatt
cggaaagccaaacctgattcctcgcctgacgagagtccaacttttacacttcatgcacat
gacaaacctgtttcctcagtatcctataatccatcagcacctaatcttctcgctactgga
tccatggacaaaacggtaaaactttgggatttgtcgaacaaccaaccttccttcgtagca
tctaattctccgaaagctggggctatctttaaaatttctttctcagaggacgatcccttc
ttgttggctatcggaggctcaaagggtaaattgcaactatgggacaccttatctgattct
ggcgtcgctcgaagatatggcagctacaagaatagatcgccatctgggtcttga
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