Vigna angularis (adzuki bean): 108337947
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Entry
108337947 CDS
T04660
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108337947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108337947
03036 Chromosome and associated proteins [BR:
var03036
]
108337947
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108337947
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108337947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
108337947
NCBI-ProteinID:
XP_052736188
LinkDB
All DBs
Position
7:complement(18553359..18559026)
Genome browser
AA seq
1022 aa
AA seq
DB search
MECDVGGVSDSFVLHTCKRRRVCKACIAPSVDIMTETEAFLPVLKSSGYYTKPSLKELLA
RDLVEPGYCGRVSDFTVGRFGYGYVRYLNETDVRGLHIDEIVNFRRHEIVVYSDENDKPA
VGQGLNKAAEVVLVLDSEILKSMEGKEDVLVNKLKQITERQEAQFISFDLVTGKWKFLVE
HFSRFGFGDDDEEDIVMDDAEVYDVEKESPSNTNEVELSHSLPSHLRLDPVKMREMRLLM
FPGDEEVEDLSHKSSSDNQYVRPLQSSAHVINHRFTPPVTRKTPFPLLEYKHGNFDSNSP
GGILMVQQHKGVPLRTVKSQGFNLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGI
LVHSGAPVGSSGDHRLLSSVINLEKVAFDNVVRDENKKVSEELLEHALVSPLKFHKGINH
VMKEVEIGPCRLKLQKLEANRTVLSEISHQYCDLIERQLSVPGLSSSTRLGLTHQVMTWE
LIRVLFSDREEKGQVESLGADNEEDMMQDMKEISQDVDREALPLIRRAEFSYWLRESVSY
HVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIA
RQLDIWRNKGLDFSFIEEERLRLYELLAGNIHDALHDIKIDWRRFLGLLMWYKLPPNTSL
PIAFQTYKHFLDEGTAPYPVPLFIDEGTLEEVISWNSDKHFDISFYLMLLHASEETKFSF
LKAMFSAFSSSPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLLCLGKCHWAIY
VILHLPLREDYPYLHVNLIREILFQYCETWSSDESQQQFIGDLGIPTDWMHEALATYYNY
NQDHSKALEQFLQCAYWQKAHTIFITSVAHRLFLQSKHAEIWSIATSMEDHKSEIENWEL
GAGIYISFYLMRNTLQGDPNSMTELDSLENKNAACQDFVSQLNESLAVWGGRLPVDARVV
YSRMASEICDLLLSSVGEGATRDEQFNCFDTAFSAPIPEDQRSGHLQDAVYLFTSYLLEI
SN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgacgttggaggcgtctctgattcattcgtgctgcatacttgtaagagaaga
agggtttgtaaagcctgcattgctccgtccgttgatatcatgacagaaactgaagctttt
ttgcctgtactgaaatcaagcggttattataccaaaccatctctgaaggaattactggcc
agggatcttgttgaacctggttattgcggccgtgtttctgatttcactgttgggagattt
ggttatggatatgtcaggtatcttaacgaaactgatgtgagggggttacatatagatgaa
atcgtcaactttcgcaggcatgagatagttgtatacagtgatgaaaatgataagcctgca
gttggtcagggccttaacaaggcagctgaagtagttttggtattagacagtgaaatattg
aagtctatggagggcaaggaagatgtgctagtgaacaaattaaaacaaattacagagaga
caggaagcgcaatttatttcctttgatctagtaactggtaagtggaaattcttagttgaa
cacttcagcagatttgggtttggagatgatgatgaggaagacatcgtcatggatgatgct
gaggtatatgatgttgagaaagaatcgccatcaaataccaatgaagttgagctttctcat
tctcttccttctcatcttaggcttgatcctgttaagatgagagaaatgagattattgatg
tttccaggtgacgaagaggtagaagacttaagtcataaatcatcttctgacaaccagtat
gtacggcctttacaaagttctgctcacgtaattaaccatcgtttcaccccaccagttaca
agaaaaactccatttccattacttgagtataaacatggtaattttgattcaaactctcct
ggaggcattttgatggttcagcagcataagggcgtgcctcttaggacagttaaatcacaa
ggttttaatcttgatctcaaacatgaaactccagtatctggaaactatgctcacaatata
gttgatgcgggtctatttatgggtaaatcatttcgagttggttggggaccaaatggcatt
cttgtacactctggtgcacctgtaggaagcagtggtgatcacaggctgttatcatctgtc
atcaatttggagaaagttgcttttgataatgtggtcagggatgaaaataaaaaagtgagt
gaggaacttcttgaacatgctttggtatctccattaaagtttcacaaaggaataaaccac
gtgatgaaagaagttgaaattggtccctgcaggttgaaacttcaaaagcttgaagctaat
cgtacggtcctgtctgagatttctcatcagtactgtgatcttattgagaggcaactgagt
gttcctgggttatcttcctctactcgtttgggtctgacgcaccaagtaatgacctgggaa
ttaattagagttcttttttctgatagagaagaaaagggtcaagtagaatctttgggtgct
gacaatgaggaagatatgatgcaggatatgaaggaaatttctcaagatgttgaccgagaa
gcactccctttaataaggagggcagagtttagttattggttacgagagagtgtttcctat
catgttcaaaatcaaataagctctctaaatgattctgattatctgcaacatatttttgtt
ctattgactgggaggcaactggatgaggcagtacaactggctgtgtccaaaggagatgtg
agattggcttgtttattaagtcaggctggtggttctactgtgaatcgctctgatatagca
agacaacttgatatttggagaaataaagggctggattttagctttattgaagaggaaaga
ttgagactctatgaattgcttgcaggaaatattcatgatgcattgcatgatatcaaaatt
gactggaggaggttcttaggtttattaatgtggtacaaattaccaccaaacacttcatta
cctattgcttttcagacttacaaacattttcttgatgagggaacggctccgtatcctgtt
cccctttttattgatgaaggaacattagaagaggttatcagttggaactcagataagcac
tttgacatttcattttatctaatgcttcttcatgctagtgaagagacaaaattcagcttt
ttgaaggctatgtttagtgcattctcttcctccccagatccacttgattatcacatgatt
tggcatcaacgtgcagtattggaagctgtgggtgttatcaattctaacgatcttcatatt
ctagacatgtcatttgtgtctcagctattgtgcttagggaaatgtcattgggccatatat
gtgatccttcacttgccccttcgtgaagattatccgtatcttcatgtaaatttgattcgg
gaaatattgttccaatactgtgaaacttggagttcagacgaatctcagcaacagttcatt
ggggatttgggcattcccacggactggatgcacgaggctttggcaacttattataattac
aatcaggatcactcgaaagcccttgagcaatttcttcagtgtgcatattggcagaaagct
catactatttttataacatcggtcgctcatagattgttcttgcaatcaaaacatgctgag
atatggagtattgcaacttccatggaggaccataaatcagaaattgaaaactgggagttg
ggagctggaatttacatttcattttatttgatgagaaacacgcttcagggtgatcccaat
tccatgaccgaattggattctcttgaaaataaaaatgctgcttgtcaggattttgtgagt
cagctaaatgaatccctggcggtttggggtggcagactacctgttgacgcaagggtggtg
tattcaagaatggcaagcgagatatgtgatttactgctatcatctgttggtgagggtgca
acccgtgatgagcaatttaactgctttgacactgctttcagtgctcccattccagaagac
cagcgctctggtcacttgcaggatgcagtatatctttttaccagctacctcttagagata
tctaattaa
DBGET
integrated database retrieval system
