Vigna angularis (adzuki bean): 108338064
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Entry
108338064 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108338064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108338064
03036 Chromosome and associated proteins [BR:
var03036
]
108338064
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108338064
Coactivators
SAGA/TFTC/STAGA complex
108338064
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108338064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
108338064
NCBI-ProteinID:
XP_052736497
LinkDB
All DBs
Position
7:14943417..14952680
Genome browser
AA seq
936 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFPGSDAVLSQGSNNTSSQ
SSSQWPTSNHDSQSDGQNQEPKTAQEQHPSEMEPKQHGSLGEHLQHVASQDVNNIHLSQK
QSQDDSHQAPAVQVPLHNSQTIGIHNSGKDSVLNKEVVKSHNPSSESQYAKLQQMSNQQA
TVSEQPSSQVNRSNKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEIQKDSFVRLMK
GIVGDQMLRLALAKVQMQPQARPNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSM
NVAVDQSRMSSSAGQTIDSNARKSQEFDVKIESQGLQPNQLTSSTSNSPAQETERASVHI
QGLNKQQQHHLHFASAYGNSGGNYNPYSGTTSTSTSSIKPQSHDSHMSQIPHQGIGSNHL
GGSTHGLGVIGMPKLEQQNSFNDPKRLPGGSVSSAVNNAASQQTSNAWQPSTNKEQNLGL
MSSVSYVKKEPGDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGGLKDEFSRGLPAST
SMPPTTSTGLLPHSSASASAVTHLDSSVLLSSQIPSNASGIAARPSLKKSAATQKKPLEA
LGSSPPPSSKKQKTSGGYAEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRK
AVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRLSK
QRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWDKKQAEAEKLRKLNDVDSNTGGDGDKD
KDDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVSS
GSQPAKDVNRKSSSTSERNTKDNQEGEKRGSTPFLASSVARKLGKSHAMAPQTRVARSIS
VKDVIAVLEREPQMSKSPLIHRLYEKIHSETPVEQG
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctatcatgaagcttctagaagatgacgaggatgaaacaatgcattcaggg
gtggatgtggaagccttccaggctgctctaaatagagatataggaggagatgtgtctgct
tctcagtttcctggttcagatgcagtgttgtctcaaggaagcaataatacatcaagtcaa
tcttcatcacagtggcctacttctaaccatgacagccaaagtgatggtcaaaatcaagag
cctaaaactgcacaagagcaacatccatctgagatggagccaaagcaacatgggtctctt
ggcgaacaccttcagcatgttgcttctcaggatgtaaataatattcatttatcacagaaa
caatctcaagatgacagtcaccaagcacctgctgtacaagttcccctccacaattctcaa
actattggaattcataattctggaaaggattcagtgcttaataaagaagtagtaaagagt
cataatcccagcagtgaatctcagtatgcaaagttgcagcagatgagtaatcaacaggct
acagtctctgagcagccaagtagccaagtaaatcgtagtaataaacaagtaccatttggc
ctgttgctacccatcttgcttcctcaacttgccaaagacagagccatgcaacttcaaacc
ttgtttactaaattgaagaaagacgaaatacagaaagacagttttgtgcggcttatgaaa
ggtatcgtgggggaccagatgcttagattagcattagcaaaggtgcaaatgcaacctcag
gcaaggcccaatcaagcatctgccgggcagcagcttcctgtaaggatgccaactgttagt
tcaggtgctagacaattgaacgatccccatgctttagcacagatgcatcaaagaagtatg
aatgttgccgttgaccaatctcgcatgagttcttcagctggccaaaccatagatagcaat
gctagaaaatctcaggaatttgatgttaaaatagaatctcaaggattgcaaccaaaccag
ttgacgtcttccacttccaactctccagctcaagaaacagaaagagcatcagttcacata
caagggctcaataagcagcagcaacatcatctacattttgcatcagcatatggaaacagt
ggtggtaactataacccttattctgggacaacaagcacttccacttcgtctatcaaaccg
caatcacatgattcacacatgagtcaaattcctcatcaaggtattggttcaaatcactta
ggtgggtcaacacatggtttgggtgtaattggtatgccaaaacttgaacagcagaattct
ttcaatgatcccaagagactgccaggtggatctgtgtcctctgctgtaaacaatgcagca
tctcaacaaacttcaaatgcttggcaaccatcaacaaacaaagaacaaaatttgggctta
atgtcatctgtttcttatgtcaagaaggaacctggtgacttgtctactgagcagcaaaat
aggcataatttgtctaaattgcatgggtattcttctgttaattctgctcagcttgaacag
agtggtgccagtcaaggaggtctaaaagacgagttttcaagaggtcttccagcatctaca
agcatgccacctacaacatctactggcttgctaccacacagttctgcttctgcttctgcc
gtgacccacctagattccagtgtcttgctaagctctcagattccatcaaatgcttctgga
attgctgcaaggccatctcttaaaaagtctgctgctacccaaaagaaaccacttgaagca
cttggttcctcacctcctccttctagtaaaaaacaaaaaacttctgggggatatgctgaa
caaagcattgaacaacttaatgacgtcactgctgttagtggagttgacctcagggaagag
gaagagcagttattttcagggcccaaagaggatagtcgagtgtcagaagcatctcgaaag
gctgtgcaagaagaagaggagaggctgatcttgcagaaagctccattgcaaaaaaaatta
attgacatcatggccaaatgtggcttgaagggtatgagcaatgatgtggagaaatgcttg
tcactgagtgtggaggaaaggatgcgcggactgataagtaacctgattagattatcaaaa
cagagggttgattttgagaaaacgagacatcggactgttgtcacttcagatgttcggcag
caaatcatgacaataaataggaaagtaagggaagagtgggataaaaaacaggcggaagca
gagaagcttcggaaactaaatgatgttgacagcaatactggaggtgatggtgacaaggat
aaggacgacggccgtgctaaatcaacaaaggtgaacaaggaagaggatgacaagatgagg
acaaatgctgcaaatgttgctgctcgtgctgcttatgggggagatgacatgctgtcgaag
tggcaacttatggctgagcaagccaagcagaaacgtgaagggggagtagacgtgtcatct
gggtctcaaccagctaaagatgtgaaccgcaaatcttcatcaacatctgaaagaaataca
aaggataaccaagaaggggagaaaagaggttcaaccccttttctagcaagttcagtggcc
agaaaactcgggaagagtcatgccatggcccctcaaactagggtagctcgaagcatctct
gtcaaggatgtgattgcagtcctggagagggagccccaaatgtctaaatccccactcata
catcgcttgtacgagaaaattcattctgaaaccccagttgaacaaggttaa
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