Vigna angularis (adzuki bean): 108338108
Help
Entry
108338108 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108338108 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108338108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108338108
03019 Messenger RNA biogenesis [BR:
var03019
]
108338108
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108338108
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108338108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
108338108
NCBI-ProteinID:
XP_017430304
LinkDB
All DBs
Position
7:complement(17813936..17822651)
Genome browser
AA seq
629 aa
AA seq
DB search
MANNCNSSSKTQPPYAPSPNHQNFLQNNGVGMTPQPQFCSGNHQSQSLLPPFMQPILMNA
APFMNAANHNHFPLQNNQMHLPQMGMPGHQQGQPLVGGLGPQNSGGNPNYSNSMYPVQGQ
VMQNAAQLNLSQLQRQMLAQSILNMLQPSHMNISMPNGQFCAPYPVQNMNQQLPTQMPSP
SQGIPHGMHPGSCPMFGFPNQRPQAMVPQNSLFSASPQLGFEPGGQVRLQIDPNIDPNEK
NLAPPNVNANALVSRLPFSSQQLQGNTSGSLNSNLAHTSNSQPPAFLKSHSQENPYGNIK
TNVPNTNWNGSPSKNFKNRPKRGGFKGGFQKSKFHDANNGRTGFPKDHNGRAGPYSGRAG
QDRLRSKELKQQPERFFSVTYTEQEIQQWREARKNNHPCNHLQKRHSECPMDSKVINREV
LQRELKEVLAKQAELGIEVAEIPSHYLKNSENRGLQNEGKNKFSDKRKFQNKFNEKLDRK
GRFGKRQKFANNISESPLSKKRKPTLLQKLLSADISKDKSHLFQVFRFMVINSFFKHCPD
KPLRYPSVMVKENGSEVDTEKDVSKRGNEGAVKKIVSLNNDDDHNSEDEDSDVDENDSIV
HNHPHEELFSLVKEEQFEKSDEEEGEILE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaattgcaactcctcctccaaaacccaacccccttatgctcctagtcctaac
catcaaaatttcttacaaaacaatggtgtgggcatgacaccccagccccagttttgttct
ggcaaccaccaaagccaaagcttgttgcccccttttatgcagccaatactcatgaatgca
gcaccttttatgaatgctgcaaatcacaatcattttcccttgcaaaataatcagatgcat
ctgcctcaaatgggtatgcctggtcatcaacagggtcaaccccttgtggggggtttaggt
ccccaaaatagtggtggcaatcccaattacagcaattcaatgtatcctgttcagggacaa
gtcatgcagaatgcagctcaactcaatttgtctcaattacagagacaaatgttggcacag
agtattttgaatatgcttcagccgtctcatatgaacattagtatgccaaacggccaattt
tgtgccccttatcctgttcagaatatgaatcaacagttacctacacaaatgccaagccct
tctcaagggattcctcatggcatgcatcctggttcctgccccatgtttgggtttccaaac
caacggcctcaggctatggtccctcagaattctttattttcagcaagtccacagttaggc
tttgagcctggagggcaggtccggctgcagattgatccgaacattgatccgaacgagaaa
aaccttgcaccaccaaacgtgaatgcaaatgctttggtatcacggttgcctttttcatct
cagcagttacaagggaatacttctgggtcacttaattctaatttggctcatacaagtaac
tctcaacctcctgcgtttttgaagtcacactcgcaggagaatccttatggcaatattaaa
actaatgttccaaataccaactggaatggatcacccagcaaaaacttcaaaaatagacca
aaacgaggagggtttaaaggaggattccagaagtctaaatttcatgatgccaacaatggg
agaactgggtttcctaaagatcataatggaagagcaggcccttacagtgggagggcagga
caggatagattaagatcaaaggaacttaagcagcaaccagaaagatttttctctgtgact
tacactgagcaagaaatccaacaatggcgtgaagcacggaaaaataatcatccttgtaac
cacttgcagaagaggcacagtgaatgcccgatggactccaaggttattaacagggaggtc
ttacaaagagagcttaaggaggttttagcaaagcaagctgaattgggaatcgaagttgct
gaaataccatcacactaccttaagaattctgaaaatcgaggtcttcaaaatgaagggaaa
aacaaatttagtgacaaaagaaagttccaaaacaagttcaacgagaaattagacagaaaa
ggtcggttcggcaagaggcaaaagtttgctaacaacatttcagaaagccctttgtcaaag
aagaggaagccaactttattgcagaaactcttgagtgcagatataagtaaagataagagc
cacctgtttcaggttttcaggttcatggtaataaattctttcttcaaacattgtcctgac
aagccccttagatatccatcagtcatggttaaagagaacgggtctgaagttgacactgaa
aaagatgtttctaaacgtgggaacgagggagctgttaaaaaaattgttagcctaaataat
gatgacgatcataatagtgaagacgaagacagtgatgttgatgagaatgactctattgtg
cataatcatccacacgaagaacttttttccttggttaaagaagagcaatttgagaaatct
gatgaagaggagggagaaattttagaatga
DBGET
integrated database retrieval system
