Vigna angularis (adzuki bean): 108338210
Help
Entry
108338210 CDS
T04660
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6 isoform X2
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108338210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108338210
03012 Translation factors [BR:
var03012
]
108338210
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108338210
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108338210
Translation factors [BR:
var03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108338210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
R3H
HA2_C
Ank_2
HA2_N
nSTAND3
AAA_19
ATPase
AAA_23
AAA_22
AAA_14
ABC_tran
AAA_7
Rad17
NPHP3_N
T2SSE
AAA_16
PhoH
AAA_25
Motif
Other DBs
NCBI-GeneID:
108338210
NCBI-ProteinID:
XP_017430452
UniProt:
A0A0L9UUP6
LinkDB
All DBs
Position
7:complement(21168012..21177615)
Genome browser
AA seq
1152 aa
AA seq
DB search
MTNNREKKGEALHRQSPKVDEVTRIRISQILEQFRASKDEVYKFDAGLSNQERALVHQMS
QKMGFRSKSSGLGKDRRVSVQKIKKKSDTDNGFANIPRFTFSEEAKWVLGDLFAHYPPGD
GDLWEMVGENSDSTADKTKQKQDDIFSRPSMSKTEIARRLEALSSRINKVSNLKQIIEDR
SKLPIASFKDVITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKIVCTQPRR
ISATSVSERISTERGETIGENVGYKIRLESRGGRQSSIVLCTTGVLLRVLVSKGYHSSKI
GHMKDDVSGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPQLRLILMSATIDAARFSQYF
GGCPIISVPGFTYPVKTFYLEDVLSIVKSKKDNHLDSTTCSTSINTRELSEEEKLSMDEA
INLAWSNDEWDMLLELVSSEGTPELFNYQHSLTGITPLIVFAGKGRVGDMCMLLSCGADC
HLKAQDGMTALEIAERQNQPEAVEILKKHLHNDFSNSTEENKLLDKYLSTVNPELVDVVL
IEQLIRKICIDSTDGGILVFLPGWDEINRTREKLFASSFFKNSSRFMLISLHSMVPSVEQ
KKVFRHPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISK
ASAKQREGRAGRCQPGICYHLYSRTRAASLPDFQIPEIRRIPIEELCLQVKLLDPNCKVE
EFLGKTLDPPVFESIRNAIIILQEIGAFSSDEKLTKLGEKLGSLPVHPSICRMLFFAILM
NCLEPALTLACASEYRDPFTLPMLPEEKKRATAAKSELASLYGGCGDQFAVLAAFECWNN
SKKMGLEARFCSQYFVSSGAMHMLSGMRRQLQAELIRNGFIHEDASSYSVNAYDPGVLHA
VLVAGLYPMVGRFIPNKIGKRFIVETAGGDKVRLHNHSTNFKLSFMKNLDHTLIVYDEIT
RSDVGMNIRNCTVVGQLPLLLLATEIAVAPTDENDDEDDAEGSEDEVGSEDGMELDAKSS
GGREDKLMSSPDNRVKVIMDRWLYFRSTAIDVAQLYCLRERLSAAILYKVTYPRNDLPPI
MAASMDAIACILSCDGCIGMPSISEGVDSLTTMVNATTLGRSGSRRFGKRPKGSLAELIN
YDGRQNSGPSKA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaacagagagaagaaaggagaggcacttcaccgccaaagccccaaagttgat
gaagtcaccaggattcgcatttcccagattctggaacagttccgagcttccaaagatgaa
gtgtacaagtttgatgctggtttgtccaaccaagagcgtgctttggtgcatcaaatgtcc
cagaaaatggggtttagatctaaaagttctggacttgggaaggaccggagagtgtccgtt
caaaaaattaaaaaaaagtctgacacagataatgggtttgcaaatattcctcgtttcaca
ttttctgaagaggcgaagtgggtgctgggtgatttatttgctcattatcctcctggtgat
ggagacttgtgggagatggttggagaaaatagtgacagtactgctgataaaacaaaacag
aagcaggatgatattttcagcaggccctcgatgagcaaaactgaaattgctaggagattg
gaagctctttcttctagaattaacaaagtctctaacttgaaacagatcattgaagataga
tctaagcttccaattgcatctttcaaggatgtaataacatcaactgttgaatctcaccag
gtagttctcatatctggtgaaactggttgtggaaagactacgcaggttccacaatttatt
ttggatcatatgtggggtaagggagaggtatgtaaaatagtttgtactcagcctcggcgg
atctctgcaacttcagtttctgagagaatctccactgagagaggagagactattggagaa
aatgtgggatataagatacggttagaaagcagagggggaaggcaatcatcaattgtgcta
tgtaccactggagtgctactaagggtgttggtttccaaaggttaccattcgtctaagata
gggcacatgaaggatgacgtttctggaatcactcacataattatggatgaaattcatgaa
agggatcgatactctgacttcatgttggcaatcatcagagacatgctcccttcatatcct
caactacgtctgatattaatgagtgccaccattgatgctgcgagattttctcaatacttt
gggggctgcccaatcatcagtgttccgggattcacttatccggtcaaaactttctatttg
gaggatgtactttctattgtaaaatctaagaaagataatcatcttgatagtaccacatgt
agtacttcaataaacaccagggagctaagtgaagaagagaagctttctatggatgaagct
attaatttggcttggtctaatgatgaatgggacatgctgttagagttggtttcttctgaa
ggaaccccagaactctttaattaccaacattctttaactggcattactccactaattgtg
tttgctgggaagggtagagtgggtgatatgtgcatgctcttatcttgtggagcagattgc
catttaaaggcccaggatggaatgaccgcactggagattgctgaaaggcaaaaccaacca
gaagcagttgaaatattgaagaagcacttacacaatgatttttccaactccacagaagag
aataagctacttgataaatacctgtcaacggtcaacccagaacttgttgatgttgttttg
atagaacaattgataagaaaaatatgcattgattcaacagatggagggatccttgttttt
cttccaggctgggatgaaataaatagaacacgtgagaaattgtttgcatcatcttttttc
aagaattcctcaaggtttatgctcatatctctacattcaatggttccaagcgtggaacaa
aaaaaggtttttaggcacccacctcatgggtgccgcaaaattgtactatcaacaaatatt
gctgaaacagctatcaccattgatgatatagtgtatgtcatagacactggacgaatgaag
gaaaaaagttatgatccttataacaatgtgtcaactcttcagtcatcttggatttcaaaa
gcaagtgctaagcagcgagagggacgtgctggccgctgtcaacccggaatatgctatcat
ctatactcaaggactcgagcagcttccttaccagattttcagattccagaaattagaaga
atacctattgaggagctttgtctgcaggtgaagttgctagatccaaattgcaaagtagaa
gaatttctgggcaagacgctagatcctccagtttttgagtccatacgcaacgctattata
attcttcaagagattggggcattttcaagtgatgaaaaactcaccaaactaggggagaag
cttggttctcttcctgttcacccatcaatctgcaggatgcttttttttgctatattgatg
aactgccttgagccagctttaactcttgcttgtgcatccgagtatagagatccgtttaca
cttccaatgttacctgaagagaaaaagagagccacagctgccaaatctgagcttgcttct
ttatatgggggttgcggtgatcagtttgctgtattggctgcattcgaatgctggaataac
tcaaagaaaatgggtctagaagcacggttttgttctcagtattttgtgtcatcaggtgcc
atgcacatgttatctggcatgcgcaggcaacttcaagcggaactaattcgaaatgggttt
atccatgaagatgcttcaagttacagtgtgaatgcatatgaccctggtgtactccatgct
gttttggtagcaggactatatccaatggtcgggagatttattccaaataaaattgggaaa
agatttatagttgaaacagcaggtggtgataaagttcggttgcacaatcattctacaaat
ttcaagttgtcattcatgaaaaatttagatcacactttaattgtgtatgatgagattact
cgtagtgacgtgggtatgaacataaggaactgcacagttgttggacaacttccacttttg
ctgcttgcgacagagattgctgttgctccaaccgatgaaaatgacgacgaggatgatgca
gaagggagtgaagatgaagttggaagtgaagatgggatggaacttgatgctaaatctagt
ggaggccgtgaggataagttgatgtcttctcctgataacagggttaaagtaatcatggac
cgttggctttattttcgttcaacagcaatcgatgttgctcagctatactgcttgagagag
agactatcagcagcaattttatacaaagtgacatatccaaggaatgatcttcctccaatc
atggcggcttctatggatgctatagcttgtattttgtcttgtgatgggtgcattggtatg
ccatcaatttcagaaggtgtggactcattaaccactatggtaaatgcaacaactttaggc
aggtcaggatctaggcgatttggcaagagaccaaaaggatcacttgcagagcttattaat
tatgatggtcgccaaaactctgggccttctaaagcctag
DBGET
integrated database retrieval system
