Vigna angularis (adzuki bean): 108338378
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Entry
108338378 CDS
T04660
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108338378
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108338378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_2
TPR_14
TPR_12
TPR_MalT
TPR_16
Motif
Other DBs
NCBI-GeneID:
108338378
NCBI-ProteinID:
XP_017430708
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Position
7:27554751..27563193
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AA seq
722 aa
AA seq
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MEAVAEGLWGLAEYHETRGEIGKAVKCLEAICQSEVSFFPIVEVKTRLRIATLLLHHSHN
VNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLLGAIPPQKQVLHKGLELTASVG
YEISMKLWSCNFNSQLANALSIEGDYQGSISALECGYVSATEVCLPELQMFFATSILHVR
LMQWDDDNLVEQAVNKCNEIWELIDLHKRRQCPGLLFYNELLHIFYRLRLCDYKNAAPHV
DNLDAAMKFDIQQTQQIQELVKELEVLDQSLSRSDLHYRDRTALSRKQTMIKEQLSSMTG
LNLIGQESLQPVYFGNVRRTIGDKLQLAPPPIDGEWLPKSAVYALVDLIVVVFGRPKGLF
KECAKRIQSGMHIIQDELVKLGITDGVREVDLQHSSIWMAGVYLMLLVQFLENKVAIELT
RAEFVEAQEALVQMKNWFMRFPTILQACECIIEMLRGQYAHSVGCYNEAAFHYIEAVKLT
DSKSMQAMCQVYAAVSYICIGDAESSSQALDLIGPVYGVMDSFVGVREKTGVLFAYGLLL
MKQQDLQEARNRLARGLQLTHTYLGNLQLVSQYLTILGSLALALRDTVQAREILRSSLTL
AKKLYDIPTQIWVLSVLTALYKELCERGNEMENMEYQAKKTEDLQRRLADAHASIYHIEI
IDKIRLQVHQLNDLDIKRAMIDPALGVNLDIPESIGLSAAMPAPSSSRFVDIDTRRRGKR
RL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtggccgagggtctatggggactcgcggagtaccacgagacgagaggagaa
attgggaaagcagtgaagtgcctggaagccatatgccaaagcgaggtttcgtttttccca
atcgttgaggtcaagactcgtcttcgcattgccacacttctcctccaccattcgcacaac
gtcaaccacgccaagtcccacctcgaacgttcccaattgcttttgaagtctattccgtct
tgcttcgaattgaagtgcagagcgtatagcttgctcagccagtgttaccatctcctcgga
gctattccaccgcagaaacaggtcttgcacaagggacttgagctcactgcatctgttgga
tacgagatttcaatgaagttgtggtcttgcaacttcaattcacagcttgcaaatgcttta
tctattgaaggggactaccagggttcaatctctgccttagagtgtggatatgtctctgct
actgaagtatgcttgccagagttgcagatgttttttgccacttcaatattgcatgtccga
ctcatgcaatgggatgatgataatttggtagagcaagctgttaataaatgcaacgagatt
tgggagttaatcgatctacataaacgaagacaatgccctggcttactattttataacgaa
ttacttcacatattctaccgattgcgactatgtgattacaagaatgctgcacctcatgta
gacaatctggatgctgccatgaagtttgatatacagcaaacacagcaaatacaggagcta
gtgaaggagcttgaagttctagatcaaagtctctcacggtctgaccttcactacagggat
aggacagcattatctagaaagcaaacaatgattaaggagcaactcagcagcatgactgga
ttgaatttaattgggcaggaatcactgcaaccagtttattttgggaatgtcagaaggact
ataggagataagcttcaattagcacctcctcccattgatggtgaatggcttcctaaaagt
gctgtctatgcattagttgatctaatagttgttgtatttgggcgcccaaagggacttttt
aaggaatgtgctaaacgcatacaatctgggatgcatataatacaagatgaattagtaaag
cttggaattactgatggtgttagagaagtggatttacaacactcttctatctggatggct
ggtgtgtacttaatgctactagttcaatttcttgaaaacaaagtggctattgaactcaca
cgagcagaatttgttgaagcacaagaggctttggtacagatgaaaaattggttcatgcgg
tttccaaccatattacaggcgtgtgaatgcatcattgagatgcttagaggtcaatatgct
cattcagttggctgttacaacgaagctgcttttcattatattgaggcagtgaagcttaca
gacagcaaatcaatgcaagctatgtgccaagtttatgcagctgtctcttacatctgcatt
ggtgatgctgaatcttcttcacaggcacttgatttgatcggcccagtttatggagtaatg
gattcttttgtaggagttagagaaaagacaggtgttctttttgcttatggtcttttattg
atgaagcaacaggatctacaagaagcaagaaatcgcctggcaaggggattgcagctgacg
catacatatttgggaaaccttcaacttgtttcacagtatttaacaatcctaggcagtttg
gcccttgcattacgtgacaccgtacaagccagggagatattgagatcttctttgacttta
gcaaagaaactttatgatattcctactcagatttgggtgctatctgttttgaccgcttta
tataaagaattatgtgaaaggggaaacgaaatggagaatatggagtatcaggcaaaaaaa
acagaagatttgcagaggaggcttgctgatgcacatgcctccatttatcatattgaaata
attgacaaaataagacttcaagtccaccaattaaacgatttggacatcaagcgtgcaatg
atagacccagctctgggagtcaatcttgatatcccagaatctattggtctgtcggcagcc
atgcctgctccttcatcgtcaagatttgttgatatagacaccagaagacgtggaaaacgg
agactttag
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