Vigna angularis (adzuki bean): 108338519
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Entry
108338519 CDS
T04660
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108338519
03041 Spliceosome [BR:
var03041
]
108338519
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108338519
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108338519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_8
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
108338519
NCBI-ProteinID:
XP_017430928
UniProt:
A0A8T0L3P0
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Position
1:complement(4573805..4578489)
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AA seq
411 aa
AA seq
DB search
MQQQRLRQHAMMQPSLYHHPALLTPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQELFSAAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYA
SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKSIVELTNGTSEEGQEIT
NDDPPEKNPQYTTVYVGNLAPEVTSVDLHHHFHSLGAGTIEDVRVQRDKGFGFVRYSTHA
EAALAIQMGNARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANVPGFSLASLAAYERQM
ALSKMGGAHALLHQQGQHALKQVAMGMGAPGAGYDARFQNVATTQHLMYYQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacagaggttaagacagcatgccatgatgcaaccctctctctaccaccacccc
gctctccttactcctcctcagatagagcctatcttgagtggaaatctgccacctggcttt
gattcgagtacatgccgcagtgtttatgtcggcaacattcatccccaggttacagaacca
cttcttcaagagcttttttcggctgcaggtgcccttgaaggatgcaagcttatcaggaaa
gagaagtcatcctatggttttgtggactacttcgatcgcagttctgctgcatttgctatt
gtaactctcaatgggaggaatatttttgggcagcctattaaggttaactgggcttatgct
agcagccagagagaggatacctcaggtcacttcaatatttttgttggtgaccttagtcct
gaggtcacagatgcgactttgtatgcttgcttctctgtatatcctagttgttctgatgca
agggtaatgtgggatcaaaagacaggccgttccaggggatttggatttgtttcttttcgg
aatcagcaggatgctcaaagtgctataaatgatttgactggaaaatggcttggaagcaga
cagattcgttgtaattgggcaacaaaaggggccagtgcaagtgatgaaaagcagagttcg
gattccaaaagtatcgtggagttgactaatggaacatcagaagaaggccaggaaataacc
aatgatgacccccccgagaagaatcctcaatataccacggtttatgttggcaatcttgct
ccggaggtcacttctgttgatctccatcaccattttcattctcttggtgccggaactatt
gaagatgttagggtgcaacgagacaaaggttttgggtttgtgagatacagtacccatgct
gaagcagctcttgctatacagatgggtaatgctcgaattctctttggcaaacctataaag
tgttcatggggtagcaaacctactcctccaggaactgcctctactcctcttccgcctcct
acttctgcaaatgtgcctggtttctctcttgctagtcttgcagcatatgaacgccaaatg
gctttgagtaaaatgggtggtgcacacgcccttctgcatcagcaaggacagcatgcccta
aaacaggtagccatgggaatgggtgctccaggggctggttatgatgcaaggtttcagaat
gttgctaccacccagcacctaatgtactatcagtaa
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