Vigna angularis (adzuki bean): 108338555
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Entry
108338555 CDS
T04660
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108338555
Transcription machinery [BR:
var03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108338555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
108338555
NCBI-ProteinID:
XP_017430992
UniProt:
A0A8T0JYV0
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Position
7:9333267..9338303
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AA seq
570 aa
AA seq
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MCSELQPPLFDGLSFSLSHSPQQNDMGLSLNANRLRYCVPLHTPHSFTNSPVSLSPSSAG
VKENCFNFTKLSLPSTFYEEAETLQKDFGRVYAFSALDTLENDSLGREETGVNKGKMSVS
SVHEIFDNTQMPFGEVSTVSKKFESFTPQHFHLLMKNLDVLEETFADSEASRLEKDIRLQ
LEKLGALELFNVCLSRSLGSSLVSDYADKVPNKGKVVVPSSKKKENKTRRKREIDVTAVS
TQSLTLKANQEDLLGFSVSVVKRATNSKSKRVMVAKREAEMAKGVKVLAELEKIRTAIED
DTKRVVTLNHWAEASGVDEKVLQQLLHHGYYCRDELIRSSRSLVLFLARKYRGMGIALDD
LLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQI
QKARKVLKSTHKKCPDDWEIAKMTGLSLDKIKSASNCLRIVASIDQKVGHCLSIEYNELL
PDTTIESPENAVLKQHMKKDVHDLLKGLNSRERQVLTLRFGLIDNQPKSLQDIGTLFKVS
KERIRKIEKIALTKLRDEATTSDLHYYLDL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaacttcaaccgccgttgtttgatggactctctttctctctctctcactca
ccgcaacaaaacgatatgggtctcagtttaaacgccaacagactcagatattgcgttcct
cttcatacccctcattccttcaccaattcacctgtttctctttctccatcttctgctgga
gtcaaggagaattgtttcaacttcacgaagttgtctttgccgtcgactttttatgaggaa
gcagaaactttgcagaaagattttggaagggtttatgcattttcggcattggataccttg
gaaaatgattcattaggaagagaagaaactggggtaaacaaagggaagatgtcagtgagt
agtgtacatgaaatatttgataatacccaaatgccttttggagaggtatctactgtctca
aagaagtttgagtcattcacgccacagcatttccatttattaatgaagaaccttgatgtt
ttagaagagacttttgccgattctgaagcatcaaggttggaaaaggatattagattgcaa
ctagagaagcttggtgctctcgagttattcaatgtttgtctatcaagatcacttggaagc
tcacttgtgtcagactatgctgataaagtacctaacaagggcaaagttgttgtcccgtct
agcaagaaaaaggaaaataaaactagaagaaagagagaaattgatgtcacagcagtttcg
acacagtcattgactttaaaagctaaccaggaagatctattaggattctcagtttcagtt
gtgaaaagagcaacaaatagtaaaagtaaaagagtgatggttgctaaaagggaggcagag
atggcaaaaggtgtaaaggtgctagctgagttagagaaaattaggacagctatagaagat
gataccaagcgcgtagtgaccttgaatcactgggccgaagcatctggagttgatgagaag
gtgctacagcagctattgcatcatggttattattgtcgggatgagctcatacggagttct
cgttccttagttctattccttgccagaaaatacaggggtatgggaatagctttggatgac
ttacttcaggcaggatatgtaggtgttctccaaggagctgagagatttgacagtacaagg
ggttacaaattctcaacctatgtgcagtactggataaggaaatcaattttaagagtggtg
gaacgatattctcgaggagtcataattccttggtcattaaacagggcaataaagcaaatc
cagaaagctcgaaaagtcttgaaaagtacacacaagaaatgcccagatgattgggaaatt
gcaaagatgacaggtctttcactagataaaatcaaatcagccagcaattgtctgagaata
gttgcttcaattgatcagaaggtggggcattgccttagtatagaatataatgaacttctg
cccgatacaacaatcgagagccctgaaaatgctgtcctgaagcaacatatgaaaaaagac
gtacatgatctcctgaaaggcttgaactcaagggaaaggcaggtattaaccctacgcttt
ggccttattgataaccagcccaagtctctgcaggatatagggacccttttcaaagttagc
aaagagaggataagaaaaatagagaaaatcgcccttacaaagttaagagatgaggccacc
acctcagacttgcattattatttggatctgtag
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