Vigna angularis (adzuki bean): 108338561
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Entry
108338561 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108338561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108338561
03036 Chromosome and associated proteins [BR:
var03036
]
108338561
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108338561
Coactivators
SAGA/TFTC/STAGA complex
108338561
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108338561
STAGA complex
108338561
TFTC complex
108338561
SAGA complex
108338561
SLIK complex
108338561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
108338561
NCBI-ProteinID:
XP_017430999
UniProt:
A0A0L9UX09
LinkDB
All DBs
Position
2:complement(1189558..1195350)
Genome browser
AA seq
543 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISSLSPDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTILTADD
VDVALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIEDKDVDLKEVIEASLPKAPLDTAV
TCHWLAIEGVQPAIPENAPIEVISAPSDTKKHEQKDDDLPVDIKLPVKHVLSRELQMYFD
KVAELTLSESDSALFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVV
SSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGSRLADNHWELRDFTANLVASICKRFGHV
YSNLQYRLTKTLLNAFLDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLETYMRLLEPEM
LLEKQKNEMKRHEAWRVYGALLRAAGQCIYDRLKMFPTFSTPSPSAVWKTNAKVLTSSSR
KREADPDQLEQQPPLKKTATDGEVGVVPMNSSPAHKQEEAETRASPVDSIIGSSSSAQMK
NETSLDGELRSNRGDTQASKTSAALTQVWKDELNSGRILVSLFDLFGEGILSFIQAPEMY
MFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgttcccaaagagacgatcgaagttatagcgcagagcattgggataagctcc
ttgtctcccgatgtcgctctcgctgtcgctcccgatgtcgaataccgcatgcgccagatt
atgcaggaggcaattaagtgcatgcggcattctaagagaaccattctcactgcggatgat
gttgatgttgctctgaacttgaagaatgttgaaccaatatatggatttgcatctggtggt
cctttgcggttcaaaagagctgttggacacagggacttgttttatattgaggacaaggat
gtagatttaaaagaggttattgaagcttctttaccaaaagcacctcttgatactgcagtt
acatgccactggctagccattgaaggtgtgcaacctgctattccagaaaatgctcctata
gaagtaatttcagctccttctgataccaaaaagcatgagcagaaagatgatgaccttcca
gttgacatcaaattgcctgttaagcatgtattatccagagaacttcagatgtattttgac
aaagttgctgagcttactttgagtgagtctgattcagctctctttaaagaagcattagta
agtttggctactgattcaggacttcatccactagttccatatttcacatgctttatagct
gatgaggtttcacgtggtttgaataattttcctcttctatttgccttgatgcgagttgtt
agtagccttctgctaaaccctcacatccatattgaaccttatctacaccagttgatgcca
tctgttgtgacctgcctcgttgctaaaaggttgggcagtaggttggcagacaaccactgg
gaacttagagactttacggctaatctggttgcctcaatatgcaaaaggtttggacatgtc
tatagtaatctccagtatcgtttgactaaaacattactgaatgcattcttggatcctaag
aaggcaatgacgcaacactatggcgcgattcaggggttgggggcactcggacccaatgtg
gttcgccttcttttgctgccaaaccttgagacatatatgcgacttcttgaaccagagatg
cttctggagaagcagaaaaatgaaatgaaaaggcatgaagcttggcgtgtttatggagcc
ttgctgcgtgctgcaggtcagtgtatatatgatcgactaaagatgttcccaactttttca
actccttctcctagtgctgtctggaagaccaatgcaaaagttcttacttcttcatctcgt
aaacgcgaggcagaccctgaccaattggaacagcagccacctttgaaaaaaactgctacc
gacggagaggttggtgtggtcccaatgaattcctcacccgctcacaagcaagaggaggca
gagactcgagcttctccagttgattcaattattggttcatcatcttctgcacagatgaaa
aatgagacttctttagatggcgaacttagaagtaacaggggtgatactcaggcatcgaag
acatctgctgctctcacccaggtttggaaagacgagcttaattctggacggatcctggta
tcactgtttgacttgtttggtgaaggaattctttctttcattcaggctcctgagatgtat
atgttcttgtaa
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