Vigna angularis (adzuki bean): 108338635
Help
Entry
108338635 CDS
T04660
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108338635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108338635
03036 Chromosome and associated proteins [BR:
var03036
]
108338635
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108338635
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108338635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
108338635
NCBI-ProteinID:
XP_017431127
LinkDB
All DBs
Position
7:3697477..3721939
Genome browser
AA seq
697 aa
AA seq
DB search
MPSDTVGNGALVPLTGDLPTVYPLHHGLASSICSLSISWSRGNTLHLSLFSATAAKVVEV
KLTSEDPEIPDVHWRRIAYGSVAPFALLQSRRSSISALLKTPSPYHSDWWENVLQYSKEI
GSLLGVSKLPPSPIIDDSKTIVKRDEEPTSLKAAWELIEIFYVDKQSQSWLPERLVDWLA
DYDSLFTSTHETIHGKLVDFQKELINIQVIEDDPRYWELLSSALSVGWLDIVVKMLRLHG
SYQLDQLSNRELENGLVETVATLISKMPRFHPESVGKLGECYKSKPDFIKSWEKWRSQIT
KLDCSPFWIQCDNQQTVEGLRNLLQIMLGNTDSLCMATCYWIELYISHFLYIRPFTMGIE
SMCSLAQKCIQLKPQSNTHRLAGLMVGILEENTEVVLAECSREFGPWLVAHAIELLTAGS
EQAEVLLHEQRYNLGGISIVELHRLVYAQILSSHALTWQIAPIYLSSCVKQGMGLLENLL
YRQSIQHNNVLLKNIEICRLYELDHISSNIMKIAGVYHWKHGHKGAGVFWLQQAQDSSCL
DRIAQQLFDSVGKSISDESFKQWEGMIELLGSESKPAGGLEFLHKYRDFKKSLQKVSVGK
STEIARQAVGSLMLLMKNPSTPQRFWLPLLYDSLKLLNWKDCPLLGVSETNLLLNKLQDL
SLAKLRPYYTEPSLPPDALSSIRLALATNLGRAILDE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggacaccgtcggcaacggggctctggtccccctcaccggagacctgccgacg
gtataccctctccaccatggccttgcctcttcgatttgtagcctctccatctcctggtcc
cgcggtaacaccctccacctctcccttttctccgccaccgccgccaaggtcgtcgaagtt
aagcttaccagtgaagatccagagattcctgatgttcactggcgccgaattgcctacggc
tctgttgcgcccttcgcgctgcttcagagtcggagaagctctatttccgctctcttgaag
actccttctccgtatcattctgattggtgggagaatgtccttcagtatagcaaggagata
ggttctcttctaggggtttcaaagttgcccccaagtcctataattgatgactcaaagaca
attgttaagagagatgaagaaccaacatctttgaaagctgcatgggagttaattgaaata
ttttatgtggacaagcaatctcaatcatggctacctgaaaggctggttgattggttagct
gattatgacagcctatttactagcacacatgaaacaattcatggcaagcttgttgatttt
cagaaagaactaatcaacatacaggttattgaggatgatcccagatactgggaattatta
tcatctgcactgtcagttggttggctcgatattgtggtgaaaatgctgcggttgcatgga
tcttaccaattagatcagctcagtaatcgggagttagaaaatggacttgtagagacggtt
gctactcttatttccaaaatgccccgctttcaccctgaatctgttggaaaattaggtgaa
tgctataaatccaagcctgactttatcaagagctgggaaaaatggaggtctcaaattaca
aaactggactgcagtccattctggattcaatgtgataatcagcaaactgttgagggcctg
agaaatttgctacaaattatgctgggtaacactgacagtctctgcatggctacatgttat
tggattgaattatatatttctcattttctatacatcaggccatttacaatgggaatagaa
agcatgtgtagtttggcccagaaatgcatccagttaaaaccacaatctaatacccatagg
ttggcaggacttatggtcggaattcttgaggaaaatactgaggttgttttggccgagtgt
tccagagaatttggcccttggttggtggcacatgccatagaactgttgactgcagggagt
gagcaagcagaggttcttctgcatgagcaacgatataacttggggggaatcagcatagtg
gaactacaccggcttgtatatgctcaaattctatcatcacatgcattgacttggcagata
gctccaatatatttatcatcgtgcgtgaagcaaggaatgggcttattagagaatttatta
tataggcaatctattcaacacaataatgtgttgcttaagaacattgagatatgccggttg
tatgagcttgatcatattagctcaaacatcatgaagatagctggagtataccactggaag
catggtcataagggtgctggggtattctggctacaacaagcccaagattctagttgtctt
gataggattgcccaacagttgtttgattctgttggaaagtcaatatctgatgaaagcttc
aagcaatgggaaggcatgattgaactactgggttctgaatctaagcctgctgggggtctt
gaatttttgcacaagtatagggatttcaagaaatcccttcagaaggtatctgttggaaaa
tcaactgagatagccaggcaagctgtaggctccctgatgctgcttatgaaaaatccatcg
actccccagcgcttttggctgcctcttctgtatgactcattaaagctgctcaattggaag
gattgccctcttttaggtgtctccgagaccaatcttcttctgaacaaacttcaagattta
tctctggcaaagctgcgcccgtactatactgagcctagcttaccccctgatgcactaagc
tctattaggctggctttagctacaaatcttggtcgtgccatacttgatgaataa
DBGET
integrated database retrieval system
