Vigna angularis (adzuki bean): 108338707
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Entry
108338707 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108338707
09122 Translation
03015 mRNA surveillance pathway
108338707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108338707
Spliceosome [BR:
var03041
]
Complex A
Other components
Complex A specific factors
108338707
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108338707
NCBI-ProteinID:
XP_017431243
LinkDB
All DBs
Position
7:complement(30041831..30044535)
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AA seq
424 aa
AA seq
DB search
MLHCTGTTSRPLFTVSTIPYRIPIMSGNYDQDGGGYGRNDGGGYGGRGGGGFGGRGGYQG
GDRGGRGSGRGGGSGRDGDWRCPNSSCGNLNFARRVECNKCGAPSPAGANDRGGGGGGYN
RGGFGNSRGGRSGNYDGGRGNGYNSSRGNNNVGRSGGGNRGSQGREDGGYGQVPAPAAQS
YGGAGGNYPPAYNSSGGSSNYETDAVPPPASYAGGPASYPPPHGSNAGGYGGGDSHNGGR
SGQPVGYDSGYGAGSQGGFGGAPDEPPAKVKQCDENCGDSCDNSRIYISNLPPDVTIEEL
RELFGGIGQVGRIKQKRGYKDQWPWNIKLYTDEKGNNKGDGCLVYEDPSAAHSAGGFYNN
YDLRGYKIAVTMAEKSAPKAPPAYNHGGNRGGYGGDRRRDNYRDAGGSGPDRRDNYGGNR
SRPY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctacattgtactggtacaacttctcgtcctctctttaccgtctctacaattccttat
cggattccaatcatgtctgggaattacgatcaagatggtggcggatacgggcgtaacgac
ggcggtggttatggtggtcggggaggtggaggattcggcggacgaggtgggtatcaaggt
ggggatcgtggtggtagaggtagtggccgcggcggcggaagtggtagagacggtgactgg
cgttgccctaactcaagttgtggaaatttgaactttgcgagaagggttgaatgtaacaaa
tgtggtgctccttctcctgctggtgctaatgatcgtggtggtggtggtggtggttataat
agagggggatttggcaacagtcgtgggggtagatctggtaactatgatggaggaagaggt
aatggttataatagtagtagggggaataacaatgttggtagaagtgggggaggcaataga
ggtagtcaaggcagagaagatggtggctatggtcaagttcctgcacctgcagcccaatct
tatggtggggctggtgggaactatccacctgcatacaattcttctggtgggagttcaaat
tatgaaactgatgcagttcctccgcctgctagctatgctggtggacctgcatcttatcct
ccaccacatgggagtaatgctggtggttatggcggcggagattcccataatggtggtagg
tctggtcaaccggttggatatgatagtggttatggtgccggtagtcaaggtggatttggt
ggagctcctgatgagccgcctgctaaggtgaagcaatgtgatgagaattgtggggattcc
tgtgacaactctagaatctacatatcaaacttacctccggatgttactattgaagaattg
agagaactttttggaggcattggacaagttggaagaataaaacaaaagagggggtacaaa
gatcagtggccttggaacataaagctatacactgatgagaaaggaaacaacaagggtgat
ggttgtcttgtgtatgaagacccttccgcagcacattctgctggcggtttttacaataat
tatgatttgaggggttacaaaattgctgttacaatggctgaaaagtctgcaccaaaagcc
ccacctgcatataaccatgggggcaacaggggtggctatggtggagatagacgcagagac
aattatagagatgcaggtggttctggtccagataggcgagacaattacggtgggaatcgt
tcacgaccatactga
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