Vigna angularis (adzuki bean): 108338715
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Entry
108338715 CDS
T04660
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108338715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108338715
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108338715
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
108338715
NCBI-ProteinID:
XP_017431258
UniProt:
A0A8T0K2I6
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Position
7:8562874..8566257
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AA seq
373 aa
AA seq
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MEMVGKEGLRTGVLNLSFGKLMMVGGGENSGKGVNLKAGVITDWKDIPVELLMQILSLVD
DQTVIIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVLSLTPKFTKLQTLILRQDKPQL
EDNAVASIANFCHDLQILDLSKSFKLTDRSLYAIALGCWHLTKLNISGCSAFSDSALAYL
ASLCRELKVLNLCGCVKAASDTALQAIGRYCNQLQSLNLGWCENVSDVGVTSLAYGCPDL
RTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSKVKNRMWGSVKG
GNDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCSGRHSLIMSGCLSLTSVHCPCAVQ
AHRGISTIPNTAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggttggcaaggagggtttgagaactggggtgttgaacttgagttttgggaag
cttatgatggttggtggtggtgaaaatagtgggaaaggagtgaacttgaaagctggggtg
atcactgattggaaagatattccagtggagcttttgatgcaaattttgtcacttgttgat
gatcaaacggtgatcatagcttctgaagtttgtcgtgggtggagagaggcaatttgcttt
ggccttacccggttgtcactctcatggtgtagcaagaacatgaataacttggtcctatct
cttactcctaaatttacaaaactgcaaactttaatccttcgtcaagacaaaccccaacta
gaggacaatgctgttgcgtctattgcaaatttctgtcatgacctgcaaatcctggacctc
agcaaaagtttcaagctcacagatcgttcattgtatgccatagccctaggttgttggcat
cttacaaaactgaacattagtggttgttcagcctttagtgacagtgctctggcttaccta
gccagtttatgcagagagcttaaagtattgaatctatgtggatgtgttaaagctgcatcc
gacactgcactacaggcaattggacgttactgcaatcagttacagtctttgaaccttgga
tggtgtgaaaatgtcagtgatgttggagtaacgagtttagcttatggctgccctgatctt
cgaacacttgacttgtgtggttgtgtccttataacagatgacagtgtaattgccttggca
aacagatgtcctcatcttaggtcccttggactgtactactgccaaaacataacagacaga
gcaatgtattctttggcacaaagcaaagtgaagaacagaatgtggggatctgtgaaaggg
ggaaatgatgaggatggattaaggactttgaacatcagccaatgcacagcactcacccct
tctgctgtgcaggctgtgtgtgactcatcccctgcactccacacctgttctggaagacac
tcgctcatcatgagtggttgtctcagtctgacatctgtgcactgtccatgtgctgtccaa
gcacaccgtggtatcagcaccattcctaatacagcacattga
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