Vigna angularis (adzuki bean): 108338718
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Entry
108338718 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108338718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108338718
03036 Chromosome and associated proteins [BR:
var03036
]
108338718
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108338718
Coactivators
SAGA/TFTC/STAGA complex
108338718
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108338718
STAGA complex
108338718
TFTC complex
108338718
SAGA complex
108338718
SLIK complex
108338718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
DSE1_N
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
CFAP251_N
PAC11
Beta-prop_WDR41
Beta-prop_NOL10_N
ASA1
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
WD40_RFWD3
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
PALB2_WD40
Nbas_N
SHKBP1_KCTD3_C
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
108338718
NCBI-ProteinID:
XP_017431261
LinkDB
All DBs
Position
7:complement(12614753..12625655)
Genome browser
AA seq
659 aa
AA seq
DB search
MDEDQIEGCVSGYLKQKGFAQNDDQLQLSKADSSLQPDTLNRSQLERGSARYHNGYGRLR
SWAYRSLESYKHELLRVLYPVFVHCFMDLVAKGHLQEAWNFFNTFREDHEMLHSRDLQKL
ELVLSPTHLEEMEFAHSLRQSKFNIKICRYSYELLLQHLHSMQSTTIIGIINEHISFQVT
AGQPSSISDDPEAVTLSGSIHDAVNQINQKEILWGMFEDSVEDHIDKAGALLSGTEKGEG
EGKEGDNDESKKRSIDVGKQGNSVKKVKKDKVSSATGKNAKPEANTISAAPRIKPEIPLP
TVSTDVELSILDDLRNRVQLSSVALPSVNFYTFVNTHNGLSCSSISHDGSLIVGGFSDSS
LKVWDMAKLEQQSTAHFSQGGNDMSQNEQIIGQNSGRRQYTLYQGHSGPVYAATFSAAGD
FLLSSSADKTVRLWSTKLNANLVCYKGHNYPIWDVQFSPAGHYFASCSHDRTARIWSMDR
TKPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRVFIGHRSMILSLA
MSPDGRYMASGDEDGTIMMWDLSSGCCVTPLVSHTSCVWSLAFSCEGSLLASGSADCTVK
FWDVTTGIKVPRNEENRSGNANRLRSLKSLPTKSASVYSLQFSRRNLLFAAGAVAKSGC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcaaatagaaggttgtgtgagtgggtatctaaagcagaaagggtttgcg
caaaacgatgaccaacttcaactttccaaagccgattcctctcttcaacccgacactctc
aatcgctctcaattggagagaggttctgctagataccacaacgggtatggcagactgaga
tcatgggcatataggtcacttgaatcatacaagcatgaattactgcgtgtgctttatcca
gtattcgtccattgcttcatggatcttgtggcaaaagggcatcttcaggaagcttggaac
tttttcaatacctttcgtgaggaccatgaaatgttgcactcacgagaccttcagaaattg
gaactagttctttctcctactcatttggaggaaatggaattcgctcattcccttaggcag
agtaagttcaacataaagatatgtcggtattcctatgagcttctattgcaacatctacat
agtatgcaatccaccacaataattggtattatcaatgagcatattagcttccaagttaca
gctgggcaaccgagctcaatttctgatgatccagaagctgttaccctcagtggaagcatc
catgatgcagtaaaccagataaatcagaaagaaatcctttgggggatgtttgaagattct
gtggaagaccacatagataaggctggggccttgctttcaggcacagaaaagggtgaaggc
gaaggcaaagagggagacaatgatgagagtaagaaaaggtcaattgatgtaggaaagcaa
ggtaattcagtaaaaaaggtaaaaaaggacaaggtcagcagtgcaacagggaaaaatgct
aagccagaagctaacactatatctgcagcacctcgcattaaaccagagatacccttgccc
acagtttcaactgatgtagaactgtctatcctagacgatttaaggaatcgtgtacaattg
agtagtgttgctctcccttcagtgaacttctacacatttgtaaatacacataatggttta
agctgttcatcaatatcccacgatgggtcattgattgttggaggattttctgactcttcc
ctaaaggtctgggatatggcaaaacttgagcaacaatccactgctcatttttcgcaggga
gggaatgacatgtcacagaatgaacaaattattgggcaaaatagtgggagaagacagtat
acattgtatcaaggtcactcaggtccagtctatgccgccacttttagtgctgccggggat
tttcttctttcctcttcagcagacaaaacagttcgactatggagtacaaagcttaatgcc
aatcttgtttgttacaagggtcacaattaccctatctgggatgttcagtttagtcctgca
gggcattattttgccagctgttcacatgacagaactgccaggatttggtctatggacaga
acaaaacctttaagaataatggcaggacatttgtccgacgttgattgtgtgcagtggcat
cccaactgcaactacattgctactggctccagtgataaaacagttcgactgtgggatgtg
cagagcggggaatgtgttcgggttttcattggtcatagaagtatgattttgtctttggca
atgtcccctgatggtcgctacatggcatctggtgatgaagatggcacaatcatgatgtgg
gacctctctagtggctgttgtgtcacacctcttgtcagtcacacttcatgtgtctggtca
ctcgctttcagttgtgaaggttctcttctagcatctggatctgctgattgcacagtcaaa
ttttgggatgtaactacgggtataaaggttccaaggaatgaagaaaatagaagtggaaat
gctaacagactcagatcattaaaaagcctgccaaccaaatctgcttcagtttactctctc
cagttttctcgcaggaatcttctttttgcagctggagctgttgcaaaaagtggttgttag
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