Vigna angularis (adzuki bean): 108338931
Help
Entry
108338931 CDS
T04660
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108338931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108338931
03036 Chromosome and associated proteins [BR:
var03036
]
108338931
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108338931
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108338931
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108338931
Noncanonical PRC1 (PRC1.1)
108338931
Noncanonical PRC1 (PRC1.3/1.5)
108338931
Noncanonical PRC1 (PRC1.6)
108338931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-Nse
zf-RING_6
zf-RING_11
zf-RING_10
zf-C3HC4_5
zf-UDP
Motif
Other DBs
NCBI-GeneID:
108338931
NCBI-ProteinID:
XP_017431495
UniProt:
A0A0L9V5C0
LinkDB
All DBs
Position
5:complement(27142981..27148862)
Genome browser
AA seq
453 aa
AA seq
DB search
MPAQKRSFPDSPHDHHRHTKHHHQEKTEEEDAQQREQDNYESNGSDSHRPPSSPSEDNSE
FVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCAS
RRSLRDDPNYDALIAALYPDIEKYEEEELEFREEDKNRNKLIQASIAKVVQRQSEALVKR
RRDTPGSFVTRAQRNQRNVLSRRQNQVMDNQGSEDNEDENDNNEKDSSSTDERCTEIRQR
RRKRRTRVRPSQPSSSTASPDRGCIESDVDIRENRGISSRPLSKPQKLTWGRGGFRSHTR
HGSGSGNGINSKSARSSRLAKLVDYLRNLNENNDELDVHLILFSLDKQSTPSLQQPHLCC
RPTLSVKHLCEYVAGQTSLPIEEVEILAVKGCCSTVCEKPFDEISSFDEQTALIIDPSKD
ELETLQGHESLTELKSKCISQRAHMILAYRRKE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcagaagcgttccttccccgattctcctcacgatcaccaccgtcacaccaaa
catcaccaccaagaaaaaaccgaagaagaagatgcacaacaacgagaacaggataattat
gaatcaaacggctcagattctcaccgccctccgtcttctccctccgaagacaattccgaa
tttgtttttgtagagcttctcgaaatacgtaaagaagtccaatgtccaatttgccttggt
attattaagaagacacgaacagttatggaatgcttgcaccggttttgcagagaatgcatt
gacaagtcgatgcgaatggggaacaatgaatgcccggcttgtcggacacactgtgccagt
cgtcgttctttgagagatgatccaaactacgatgctctgattgcagctttatatccagac
attgagaagtacgaggaagaggagcttgagtttcgtgaagaggacaagaaccgcaataag
ctgattcaagcttcaattgcaaaagttgttcaacgacaatcagaagcactggttaagaga
cgcagagatacaccaggttcatttgtaacaagagcacagcgcaatcaacgaaatgttctt
tctaggagacaaaaccaagtaatggataatcaaggatctgaggataatgaggatgaaaat
gataacaatgaaaaggactcatcttccacggatgagcgatgtacagaaattaggcagaga
aggcgaaagaggcggacccgagttcgcccttctcagccatcatcatcgacagcaagtcct
gacagaggatgcatagaaagtgatgtggacataagagagaatcgaggaatttcttctaga
ccgttgtcaaaacctcaaaagctaacatgggggaggggtggttttaggagtcacacacgg
catggcagtggcagtggcaatggtatcaatagcaaaagtgcccgcagtagccgcttggcg
aagttagttgattatctccgtaatttgaatgaaaacaacgatgagttagatgttcatctc
attcttttctctctggacaaacaaagtacaccaagcttgcagcagccacacctttgctgt
cgaccaactttgtcagtgaagcacctttgtgagtatgttgctggccagacatctttgcca
attgaagaagttgagatattggcagttaaaggatgctgcagtacagtttgtgaaaagcca
tttgacgagatttcatcctttgatgagcaaacggcactgataatagatcctagcaaagat
gaactggaaactctgcaagggcatgaatctttgacagaacttaaatccaaatgcatatct
caaagggcgcatatgattctggcatacaggcggaaggagtga
DBGET
integrated database retrieval system
