Vigna angularis (adzuki bean): 108339113
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Entry
108339113 CDS
T04660
Name
(RefSeq) E3 ubiquitin-protein ligase At3g02290
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108339113
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108339113
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108339113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf_RING_Vps8
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_16
zinc_ribbon_16
zf-RING_Vps41
Prok-RING_1
PHD_NSD
zf-C3H2C3
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108339113
NCBI-ProteinID:
XP_052734050
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All DBs
Position
5:6425080..6426464
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AA seq
285 aa
AA seq
DB search
MVIRGMTIDSNYLVDVDENGMIYGMTQHHRLHHQPSYSNNFIWGHYSTLVWYPNPPISYV
QAPPPSANVSSLEENTRMSLRRRRHHHRFLHRQYRAQEIRRHSNFHSYVTASPYRVPETT
NHSRSSSMPIQNAPNRDNMHNLHPPAFREFPSYMIMDTDDMSYETLYNVQEFPSLGDPHS
DMRLDIDGMSYEELLELSEWMNGNSERGLSEDIIARHMQTKSYLLLENLGDQESDICIIC
QDEYKNKEEIGILQCGHEYHAECLKRWLHEKNVCPMCKSKGLTIE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtaataagaggaatgactattgattccaattacttagtagatgttgatgaaaatgga
atgatatatggaatgacacaacaccatagacttcaccatcaacctagttactctaacaat
ttcatttggggtcattattcgactttggtttggtatccaaatcctccaatctcctatgta
caagctccacctcctagtgctaatgtaagctcattagaagagaatacaagaatgagtctc
cgaagaagaagacaccaccacagatttctccatcggcaataccgtgcgcaagagatcaga
cgtcactccaactttcattcctacgtaactgcttcaccatatagagttccagaaacaaca
aatcattcaagaagttcttcaatgcccatacaaaatgcacctaatagagacaacatgcat
aatcttcatcctcctgcgtttcgtgaatttccttcgtatatgatcatggacactgatgac
atgtcatacgagacactttataatgtgcaggaatttccttcattaggtgaccctcatagt
gatatgcgcttggacattgatggcatgtcatatgaggagcttcttgagttaagtgaatgg
atgaatggcaactcagaaaggggtttgtcagaagacattattgcaagacatatgcagaca
aaaagttatctactacttgagaatttgggggaccaggaatctgatatttgcataatatgc
caggatgaatataaaaataaagaggagattggaattcttcaatgcggacatgaataccat
gcagagtgtttaaagagatggttacatgagaaaaatgtttgtcccatgtgcaaatcaaaa
ggattgactattgaatag
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