Entry |
|
Name |
(RefSeq) sm-like protein LSM7
|
KO |
K12626 | U6 snRNA-associated Sm-like protein LSm7 |
|
Organism |
var Vigna angularis (adzuki bean)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:var00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108339764
09123 Folding, sorting and degradation
03018 RNA degradation
108339764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:var03019]
108339764
03041 Spliceosome [BR:var03041]
108339764
Messenger RNA biogenesis [BR:var03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108339764
mRNA degradation factors
5'-3' decay
Lsm complex
108339764
Spliceosome [BR:var03041]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108339764
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:27227104..27230033
|
AA seq |
99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA |
NT seq |
300 nt +upstreamnt +downstreamnt
atgtcgggcagaaaagaaacggttctagaccttgcgaagttcgtagacaaaggcgttcaa
gttaagcttactggtggacgacaagttacagggactctaaaagggtatgatcagttactt
aacctcgtcctagatgaagcagtggagtttttaagagatcctgatgatcctctcaaaact
accgatcagaccagacaacttggcctaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgaaatcgccaacccctttatacagccagatggggcttaa |