KEGG   Vigna angularis (adzuki bean): 108339764
Entry
108339764         CDS       T04660                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108339764
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108339764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108339764
   03041 Spliceosome [BR:var03041]
    108339764
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108339764
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108339764
Spliceosome [BR:var03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108339764
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 108339764
NCBI-ProteinID: XP_017432454
UniProt: A0A0L9V5J1
LinkDB
Position
5:27227104..27230033
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcagaaaagaaacggttctagaccttgcgaagttcgtagacaaaggcgttcaa
gttaagcttactggtggacgacaagttacagggactctaaaagggtatgatcagttactt
aacctcgtcctagatgaagcagtggagtttttaagagatcctgatgatcctctcaaaact
accgatcagaccagacaacttggcctaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgaaatcgccaacccctttatacagccagatggggcttaa

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