Vigna angularis (adzuki bean): 108339867
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Entry
108339867 CDS
T04660
Name
(RefSeq) structure-specific endonuclease subunit slx1 isoform X2
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108339867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108339867
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108339867
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
DUF1681
Motif
Other DBs
NCBI-GeneID:
108339867
NCBI-ProteinID:
XP_017432576
UniProt:
A0A0L9V834
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All DBs
Position
5:40148161..40150808
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AA seq
168 aa
AA seq
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MRTLSTQFRSIKRPNPNPKLCKSSSPTKSELKFNAKPKSESESWCVYLILSTNHPIKTYV
GITNNFPRRLKQHNGELNGGAKASRAGRPWICACIICGFADRSEASIFESKWKAISRKAP
RKNQNEHLSEQSEDPSLPLLQHRQAALKKVKGSLDCTHLEFVWHLDPL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgctgtctacccaatttcgttccatcaaacgccctaatccaaaccctaaatta
tgcaaatcgtcctctccgacaaaatcagaactaaaattcaatgccaaaccaaaatcagag
tcagagtcatggtgcgtttatctcatcctctccaccaaccatccaatcaaaacctatgtt
gggatcacaaacaatttccctcgccgtttgaagcagcacaatggggaacttaacggtggt
gcaaaggcatcccgtgctggaaggccttggatctgtgcatgcatcatttgcggttttgca
gaccgaagtgaagctagtatatttgaatcaaaatggaaagctatctcaaggaaagctccc
cgcaaaaatcaaaatgaacatctctctgaacaaagtgaagatccatcattacctctgctg
caacacagacaagcagctttgaaaaaagtgaaaggttcactcgactgcactcacttagaa
ttcgtttggcatttggatccattgtga
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