Vigna angularis (adzuki bean): 108340225
Help
Entry
108340225 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108340225
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
var03016
]
108340225
Enzymes [BR:
var01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
108340225
Transfer RNA biogenesis [BR:
var03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108340225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
108340225
NCBI-ProteinID:
XP_017432932
LinkDB
All DBs
Position
5:complement(40912903..40917946)
Genome browser
AA seq
613 aa
AA seq
DB search
MEDIEDLLAGSGSATPPGFRLPLAAAVGVGVGVGSKRNKLSSSPSPAIPGTQTIYIKTFG
CSHNQSDSEYMAGQLSAFGYSLSDNPDQADLWLINTCTVKSPSQSAMDTIITKGKSSNKP
LVVAGCVPQGSRYLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKTLPALDLPKV
RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISDGVKEIWLSSED
TGAYGRDIGVNLPTLLKALVEELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSF
LHVPVQSGSDTVLTAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFVQT
VDLVKDYKFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKV
ERIWITDIASDGIHLVGHTKGYIQVLVLAPDHMLGASAMAKITSVGRWSVFGEVIETIDH
VSDSKALNKLVPDRDLHSLCVNPAKPGGFSEDPESCACGSDICCSIDKSDASRGNAVQQN
QNNRNLVGWILRKREHLHKKVESELASGSVKKHERKMKKWDFVDKVLLGGISISIFTIIA
LVAALAFRVIWSQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattgaagatttgctggccggaagcggaagcgcaactccaccgggcttccgt
ttgccgttggcggcagctgtgggcgttggtgttggcgttgggagcaagcggaataaactc
tcttcttcgccttctcctgcaattcctggcactcagactatctacataaagacctttggc
tgctctcacaaccagagtgacagtgaatatatggctggccagctttctgcttttggttat
tctttgagtgacaatccagaccaagcagatctctggctcattaacacttgcacagtgaaa
tcccccagtcaatctgctatggataccatcataacgaaaggaaaatcttcaaataaacca
ctagttgttgctggctgtgtccctcaaggaagtcggtatttgaaagaactggaagggatc
agcatagttggagtccagcaaattgatcgtgttgttgaaattgtagaagagactttgaaa
ggtcacgaagtccgccttttgacccgtaagacattgccagcactcgaccttccaaaggta
aggaagaacaagtttgttgagattcttcctattaatgttggttgtttaggtgcctgcact
tattgcaagacaaagcatgctcggggtcacctaggaagttatacaattgatagccttgtt
gggcgtgtaaaatctgtcatttctgatggagttaaagagatatggcttagcagtgaggac
actggagcatatggtcgtgacattggtgtgaatcttccaactttgttgaaggccttagtg
gaagaactaccagctgatgcaagcacaatgctacgtattggaatgaccaatccaccttat
atccttgaacacttgaaggaaatagctgagattttgcggcatccttgtgtgtactccttt
ctacatgtaccggttcagtcgggaagtgatactgttttgaccgcaatgaatagggaatat
actgtgagtgagttcaggactgttgtagatactctaactgagcttgtgccagagatgcag
attgccactgatataatatgtggatttcctggtgaaactgatgaagattttgtgcagact
gtcgatcttgttaaagattacaagttccctcaagttcacatttcacaattttatcctcga
ccagggacacctgctgcaaggatgaaaaaggttccaagtaatgtggttaagagaagaagc
cgagaattgacaaatgtctttgaatcattcacaccatactctgggatggaaggcaaagtg
gaaagaatttggattactgatattgcatctgatggaattcacttggttggtcatacgaaa
ggatatatacaagttcttgtacttgctccagaccatatgctgggagcttcagctatggct
aagataacatctgtgggaagatggtctgtctttggggaagtaattgagacaatcgaccat
gtaagtgacagtaaagctctaaacaagttggttcctgatcgggacttgcattctctctgc
gttaacccagccaagcctggtggattctcagaagatccagaatcttgtgcatgtggaagt
gacatctgttgtagtatcgacaagagtgacgcttcaagaggcaatgcagtgcaacagaac
caaaataatagaaatttagttggatggatactaaggaagcgggagcatctgcacaaaaaa
gttgagagtgagcttgcctcgggatctgttaaaaagcatgaaagaaagatgaagaagtgg
gacttcgttgataaggttcttttgggtggaatatctatcagcatctttactattattgct
cttgtagcagctcttgcgttcagagtaatttggtcccagtaa
DBGET
integrated database retrieval system
