Vigna angularis (adzuki bean): 108340261
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Entry
108340261 CDS
T04660
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108340261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108340261
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108340261
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108340261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
108340261
NCBI-ProteinID:
XP_017433000
LinkDB
All DBs
Position
5:complement(35193825..35218558)
Genome browser
AA seq
1394 aa
AA seq
DB search
MNRGRTEGITFTKEPFMEDAGPRKIKNMMFSTLSDSDISKLGEVQVWKGSYYDSFKKPIH
GGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLSSIVEILKCICKGC
ARILLDEDTRKKHLKKMRSTKKSELDKIDFVKVHVIKDCSKVVNCPRCGYINGSVKKLPA
SLTIMHDCSKCNNNIVEELESTLSRIKDSRATTNVSNRILNPFQVLSLFKKILDEDCELL
YVAERPEKLIITNIIVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESSV
SSKLLDGWDILQMEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVE
YTGRTVISPDPNLKISEVAIPILMAHILTYPERVTHHNIHKLRQCVRNGPDKYPGARMLR
RDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPW
RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQ
DFLTSSFLITRKDTFYDRSVFTNICSYLGDGLDPIDLPTPAIVKPIELWSGKQLFSLLLR
PHANVKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNSELISGQIGKVTLGNGNK
DGLFSVLLRDYKTHAAGSCMNRVAKFSARWIGNHGFTIGIDDVQPKEILIKKKDETLLEG
YTKCDNHIQAFNKGKLELLAGCDAAQTLETRITGVLNGLRDMAGKVCMQTLHWRNSPLIM
SQCGSKGSPINISQMVALVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYT
GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNASGSIVQF
CYGDDGMDPSGMEGKNGKPLNFERMFLKSKAICPIKDDDEILSSSTVCKVVQEKLSEFGV
SREVEKGVLEVGFSAEFVESLQSFIKGSTKLTEEAFTDENSQILKKFGQRISGITRRQLE
VFLNICLSRYHSKKMDAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKE
IMNGNKKISTPIITAILERDDSANTARIVKGRIEKTNLGQVAKSIKVVLTSRLASVVITL
DMERIQDAHLNIDANTVKESILQTKKTKLKPEHIKILDIKKLRVVPQDADRSKLHFQLHY
LKNLLPTVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGMGFREVMGVEGVDGCRTLSN
HILEVRDTLGIEAARECIVKEIKYTMVDTHGMNIDTRHMMLLADVMTSTGNILGINRFGI
SKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGTGMIKVKQRLDP
PDLPHGASPILSRC
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaatagggggagaactgaaggcataacctttacgaaggaacctttcatggaggatgca
gggcctcggaagataaagaacatgatgttctccacgttatcagattcggacataagcaaa
cttggtgaagttcaagtgtggaaaggatcctactatgattcctttaagaaacctatccat
ggtggcttgttggatcctcgcatgggtcctgctaataagagtcttggctgtgctacatgc
catgggaattttcatgactgcccaggacactatggatacttaaaccttgcccttcctgtt
ttcaatgttggatatttaagtagcattgtggaaatactgaagtgcatttgtaagggctgt
gctcggattctccttgacgaagatacccgtaaaaagcatttgaagaaaatgagaagtacc
aaaaagagtgagctggataagattgattttgtgaaagttcatgtaattaaagattgtagc
aaagttgtgaattgccctagatgcggatatatcaacggttcagtgaagaagcttccggct
tcactaactatcatgcatgattgttcaaaatgtaacaataatattgttgaagagctcgaa
tccacactttctcggataaaagactctagggcaacaaccaatgtgtctaatagaattctt
aatcctttccaagttctttcgctgtttaaaaagatccttgacgaggattgtgaattactt
tatgttgctgaaagaccagagaaacttataataacaaacattattgtgccacctatagct
attcgaccttcagttgtaatggatgaatcactgagcaatgaaaatgacataactgaaagg
ctaaagaacataatccaagcaaatgctgttttgcgccaggaattacaagaatcaagtgtt
tcatccaagcttctggatggttgggatatccttcaaatggaagttgctcaattcataaat
agtgaagttcgagggataccgttctatatgcaatcaaccaagcaattggctggttttgtt
cagcgcttgaaaggtaagcatggacgtttccgtggcaacttgtctggaaaacgtgttgaa
tatacaggcagaacagttatttctccagatcctaatctgaagatttctgaggttgcaata
cccatccttatggctcatatattaacttatcctgagcgtgttacgcaccataacatacat
aagttgagacaatgtgtgagaaatggtcctgataagtatcctggtgcaagaatgcttaga
cgtgatggaggtcactcatggtccttaaaagttctttgtaggaagcgtgctgcagatgaa
ttgaggattggtgatattgttgatcgccatttagaagatggagacattgttcttttcaat
agacaaccaagcttacatcggatgtctataatgtgtcacagggcaaggattatgccttgg
agaactttaagattcaatgaatctgtatgtaacccatataatgctgactttgatggtgac
gagatgaacttacatgtcccacagactgaggaggctcggacagaggctattttgttgatg
ggggtgcaaaacaatttatgcacaccaaaaaatggcgagattctggtcgcttctactcaa
gactttttaacctcttcctttctcataaccagaaaagatacgttttatgaccgttctgtt
tttacaaatatttgctcttacttaggtgatggcttggatcctattgatttgccaactccc
gcaattgttaagcccattgaactttggagtgggaagcagttatttagccttctactgcgc
ccacatgcaaatgtaaaagtctatgtgaatcttactgttaaggagaaaacgtacacaaag
cttgatgacaagaaaagagaattgaaaacattgtgcccaaatgatgggtttgtttatttt
cgtaattctgagttgatctcaggccaaatcggaaaggttactttaggaaatggcaataag
gatggactgttctctgtgctactgagagactataaaacacatgcagctgggtcttgcatg
aatcgtgtagctaaatttagtgcgcgatggattggtaatcatgggttcaccataggcatt
gatgacgtccaaccaaaagagatactgattaagaagaaagatgaaacacttttagaaggt
tatacgaaatgtgataatcacattcaagctttcaataaaggaaaactagaactcttagct
ggttgtgatgctgctcaaacattagagactcggattactggggtattaaatggactgcgt
gatatggcagggaaggtttgcatgcaaacccttcactggagaaatagtccattgatcatg
tcacagtgtggatccaaaggatctcctattaatatcagtcagatggttgctcttgttggt
caacagtcagtgggtggtcgtcgtgcacctaatgggttcctggatcggagtcttcctcat
ttccctctaaatgcaaaaacccctgctgccaaaggttttgttgctaattcattttacact
ggattgtctgctactgagtttttcttccacacaatgggagggcgagaagggcttgttgac
acagcagttaaaactgcagacactggatatatgtctcgtcaattaatgaaatccatggag
gatttgtttttacattatgattacactgtaagaaatgccagtggttctattgttcaattt
tgctatggagatgatggcatggatccatcaggcatggaaggaaaaaatggaaaaccatta
aattttgagcggatgtttcttaaaagcaaggccatatgtcccattaaggatgatgatgaa
attttatcttcctcaactgtgtgcaaagtagttcaagagaagctgtcagaatttggtgtg
tctagggaagtggaaaaaggggttttagaggtgggcttctctgcagagtttgtagagtct
ctacagtcctttattaaaggtagtaccaaattaacagaagaagctttcactgatgaaaat
tcccaaatcctgaaaaaatttgggcagaggatatctgggatcactcgtagacaactagag
gtttttctgaatatttgtctatctcgttatcattcaaaaaaaatggatgctggagctcct
gtgggtgcaactggagctcatagtattggagagcctgggacccagatgactttgaaaact
ttccactttgctggagttgcaagcatgaacgtcactcttggagttccacgtgtcaaagaa
ataatgaatggtaacaagaaaatcagtacaccaattatcacggcaatacttgagagagat
gacagtgcaaatacagcaagaatagttaaaggtcgaatagaaaaaacaaatttgggccag
gttgcgaagagtataaaagttgttttgacttcaagattagcgtcagttgttatcaccctt
gacatggaaagaatccaggacgcacatctaaatatagatgctaatactgttaaagaatca
attttacaaactaaaaagacgaaactgaagccagagcacatcaagattttagatattaaa
aagcttcgagttgttccccaagatgccgatagaagtaaattgcattttcagcttcattat
ctaaaaaatttgcttccaacagttgtggtaaagggaattaaaactgctgatcgagttgtt
atcagtaaagaagaagataaaatcaccaaggctgaaaagttcaaattactggtagaaggc
atgggctttcgagaggttatgggagtggaaggggttgatggatgtagaactcttagtaat
catattcttgaagtgcgggacactctgggaattgaagctgccagagagtgtattgttaag
gagataaagtatacaatggtggatacacatggaatgaatatagacacgcggcatatgatg
cttctagcagatgtgatgacttccacaggtaatatcctcggaataaatagatttggaatt
tcaaagatgggcaaaagtgtattaatgcttgcatcattcgagaggacagcagatattctt
ttccaggcatctgtacgtgggagggatgactcaattggtggagtaagtgaatccataatc
atgggtataccaattacaataggtactggaatgatcaaggtcaaacaaaggttggatcct
ccagatttgcctcatggagccagtcctattttgtctcgatgttga
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integrated database retrieval system
