KEGG   Vigna angularis (adzuki bean): 108340273
Entry
108340273         CDS       T04660                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03030  DNA replication
var03410  Base excision repair
var03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108340273
   03410 Base excision repair
    108340273
   03420 Nucleotide excision repair
    108340273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:var03032]
    108340273
   03400 DNA repair and recombination proteins [BR:var03400]
    108340273
Enzymes [BR:var01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108340273
DNA replication proteins [BR:var03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    108340273
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      108340273
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 108340273
NCBI-ProteinID: XP_052733398
LinkDB
Position
5:complement(32319328..32354840)
AA seq 2219 aa
MSGDGRRRDRRDTRAPKKRKLNRNPEDELEAKLGFDLFSEGEKRLGWLLTLASSSVQDEN
SYKEYSCVDLYFVTQDGSSFKSKFRFRPYFYVATKDKMEMDVEAYLRRRYEGQIADIEII
DKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPSVERNKAKSDTAEAFVSMSTER
REHRPQDFLDCLTDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNNGVKLEKRTDLLQRAE
VRVCAFDIETTKLPLKFPDADYDLVMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEF
EGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHLGLKMSDELG
FKCDTNQGECRAKYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPVEVHPEDMVRF
AKEKPQMMASYSVSDAVATYYLYKTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMV
QAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFTLEPSAFQ
QLINNLDRDLQYAITVEGKMDLESVSNYDEVRNAIMEKLVKLRDVPTREECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFIAKKSDYYALKT
QIESEFVDDSENNKSLPRYSEKRSSKSFLDLPKSEQISRLKDRLKKYCQKAYKRVLDKPV
TEIREAGICMRENPFYVDTVRSFRDRRYEYKGLNKIWKGKLSEAKASGNSMKIQEAQDMV
VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLE
LDTDGIWCALPGSFPENFTFKTKDPKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPIRK
TYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL
KLIKVFQAELFDKFLHGSSLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTM
SKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIF
ETDAEVMKFYVRKWCKVSLEVAIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVSNPVPRV
AHPDWLHKKVREKEDKFRQRKIVDAFKPMNKNEHLKKLNDSNRVSLVMDDEILNELEDFG
NKGRSSTYGPRPIIRHYEANNEQNSRKLSDQQDLEQEHSKDNSSKKNLLSPPQQDETYEN
IDRNVDYQGWLQVKKRMWKNILERRKKQRLEKSKISNRMNGVSEQINGKRNLGRSHVSSY
LKRLEVDLTKCHWQIIQLVPSSLIGQFVAWVVVDGSMHKIPVSVPRVFYLNSRSPITEEF
MGKRVNKNLPHGRLNYNLYEVSISEIQYGEVSKKLATLLADPDIEGIYETKVPLEFNALI
QLGCVCKVDKTANKRSLHEPWNLSELHMKTTTECVYLEQSLSFFYLYHSISEGRAIYVGY
FPASKAITVVVVNPYQNKDLLPTFLERQFHDACQALSIDPPPRNDINFKVDYVAHVKDAE
TVMQRAINSHSHGRENHVPMVAVIECPNVQLVKLGIRALDDFPCLSVPYNARDSQYQILG
WQQTAGKVGMQRCAASVRWLNERIALSRYAHVPLGNFELDWLIFMADIFFSRALRDNQQV
LWISDDGLPDLGGINGEQNFFVDEVQQPVLTYPGAYRNVTVELKIHHLAVNALLKYSLVN
EMEGGTLLGFGHEHDSGAFSMNDQNGFDESTSCAHAFRVLKQLIQRCLADAVTSGNVYAD
SILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFTKIIIDT
GKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPVKSDEAMND
KSQVDIISSWNIAEYLPKKVQDHFVFIVSQFMYIPWNYAQNQAQIRASFKDGDTCTPSIS
IGAAAAFESEITEYIKEQISSYFADKLLGIVHDISLHMKGVSRSENNQSISPGPELHRGD
AALEFIKHVCAVLALDQSVQHEVLVLRKNLLKYVGVREFAPEAEFHDPCHSFVLSNVICS
YCNDCRDLDLCRDLALLTEEWRCAVPQCGQPYDREVMENALLQTVRQRERLYHLQDVVCI
KCHQVKAAHLAEQCACAGSFSCKEDANEFRRKMQVFFNIASRQKFQLLLECTSWILELR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgagcggggatggtcgacgacgtgaccggagagataccagagcaccgaaaaagcggaag
ctaaaccgcaaccccgaggatgaactcgaagctaaattagggttcgatctgttttcagag
ggtgaaaagcggctcggatggctactcactcttgcatcctcatctgttcaggatgaaaac
agttacaaagaatacagttgtgtcgatctttactttgttacacaggatggctcttcattc
aagtcaaaattcagatttcggccttacttctatgtagctacaaaggataaaatggagatg
gatgttgaagcatacctgagaagacgttacgaaggtcagattgctgatattgaaattata
gacaaagaagacctggatcttaaaaatcatttatcaggattaagaaaatcttatttaaag
ctttcatttgatactgtacaacaattgatggatgtgaagagagacctgatgccttctgtt
gaaagaaataaggctaagtctgatactgcagaagcctttgtatccatgtcaacagaaaga
agagaacatagacctcaggactttctagattgcttgactgatcttcgagaatatgatgtt
ccttatcatgttcgctttgccattgacaatgatatacggtgtggccagtggtatgatgtt
ggagtgtccaataacggggttaaacttgaaaagaggacagatcttctgcagcgtgctgaa
gttcgagtttgtgcatttgacattgagaccacaaaacttccattaaagtttcctgatgct
gactatgatttagttatgatgatttcatacatggtagatggtcaggggtatttaatcata
aatagggagtgtgtcggggatgatatagaagatatagagtacactccaaaaccagagttt
gaagggtgttttaaagtgacaaatgttcaaaatgagattgagcttcttagattgtggttc
tctcatatgcaagaggtgaaacctggtatctacgtgacgtataatggtgatttttttgat
tggccattcctggaacgaagggcaacccatcttgggttgaaaatgagtgatgaattgggg
ttcaaatgcgacacaaaccaaggggaatgtcgtgctaaatatgcttgccatttggattgt
tttgcttgggttaaacgtgatagttatctccctcaggggagccaaggcttgaaggctgtt
acaaaagcaaagttgggatatgatccagtggaggtgcatcctgaagacatggttcgattt
gcaaaggaaaagcctcagatgatggcctcctattctgtttctgatgcagtggcaacttat
tacttatataaaacttatgttcatccctttatattctctcttgcaaccattatacctatg
ccacccgacgaggttttgcgcaaaggtagtggaaccctatgtgaaatgttgcttatggtg
caggcatacaaggccaatgttatatgccctaacaaacaccagtctgatccagagaagttt
tataataatcatcttcttgagagtgagacatacattggtggtcatgtggaatgtcttgaa
agtggtgtattcagatctgacatcccatctagttttacattagagccatctgcttttcag
caacttatcaacaaccttgatcgagatctacagtatgctataacagtggagggcaagatg
gatttggaatctgtttctaattatgacgaagtaagaaatgcaatcatggaaaagcttgta
aaattacgagatgtgccaacacgtgaagaatgtcccctcatttatcacctggatgtagct
gctatgtatccaaacataattttaacaaaccgacttcagccaccatcaattgttaccgat
gaagtctgcactgcatgtgattttaatcgtcctggaaagacttgcctacgtaagcttgag
tgggtttggcgcggagaaacattcattgcaaagaaaagtgactactatgctttaaagaca
caaatagaatcagagtttgttgatgattctgagaacaacaaatccttaccccgctattct
gagaagaggtcatcaaaatcctttcttgaccttcccaagtcagagcaaatatcaagattg
aaagatcgtttaaagaaatactgccagaaggcatataagcgggtacttgacaaacctgtt
actgaaattcgtgaagcaggaatctgcatgcgggaaaatccattttatgttgacactgtt
cgcagtttccgggatagaagatatgaatataaaggtctcaataagatttggaagggaaaa
ttgtcagaggccaaggctagtggaaattctatgaagatccaagaagcacaggatatggtt
gtgctttatgattcattgcaacttgctcacaagtgtatacttaattccttttatggatat
gtcatgcgcaagggtgcaagatggtattccatggaaatggctggagtagtgacatatact
ggtgcaaaaataattcagaatgcccgcttgctagtagaaaaaataggaaaaccacttgaa
ctagatacagatggtatttggtgtgcactacctggatcttttccggaaaatttcactttt
aaaacaaaagacccaaagaagaagttcacaatatcatacccttgtgttatgcttaatgtt
gatgtggcaataaataatacaaatgatcaatatcagacactcacagatccaatcaggaaa
acttatacaactcatagtgaatgctctattgaatttgaggtggatgggccatacaaggca
atgatccttcctgcttcaaaggaagaaggaattttgattaagaagcgatatgctgttttt
aatgatgacggaacccttgcagagcttaaaggttttgagatcaagcgcagaggtgaactg
aagctaatcaaagttttccaggctgaactttttgacaagtttctccatggttcatcatta
gaagaatgctattcagctgttgcttcggtggcaaaccgctggcttgatcttcttgataac
cagggaaaggatatcgcagacagtgagttgcttgattatatatcagaatcaagtaccatg
agcaaatctttagctgattatggtgagcagaagtcttgtgctgttaccacggctaaacgt
ctagctgactttcttggagatacaatggtcaaagataaaggtcttcgatgtcagtacata
gttgcaagtgaaccaaagggcacaccagttagtgagcgtgctattcctgtggcaatattt
gaaactgatgctgaggtaatgaagttctatgtccgaaaatggtgcaaagtttcattggaa
gttgccattcgttcaataattgattggtcctattacaagcagcggcttagttctgcaatt
caaaagattgtcactattcctgctgcaatgcaaaaggtttcaaaccctgtccctagggta
gctcatcctgattggttgcacaaaaaagttcgggagaaggaggacaaatttcgccaacgg
aaaatagttgatgcctttaaaccaatgaacaagaacgagcacttgaaaaagcttaatgac
tcaaatcgtgtctctcttgtgatggatgatgagattcttaatgagttagaggactttgga
aacaagggtaggagttctacttacggacctagaccaattataaggcattatgaagctaat
aatgaacaaaattcgaggaagctcagtgatcaacaagatttagagcaagagcatagtaaa
gataatagcagcaagaaaaatctactttcaccaccacaacaagatgaaacgtatgaaaat
atagacagaaatgtagattatcagggatggcttcaagtaaagaagcgaatgtggaaaaat
attctggaaagaagaaagaagcaaagattggagaaatcaaagatatctaatcgcatgaat
ggtgtttctgaacaaataaatggtaagaggaatctaggaagaagtcatgtcagttcatat
cttaaaaggcttgaggtagacttaacgaagtgtcattggcagataatacaattagttccc
agttcactgataggccaatttgttgcttgggttgttgttgatgggagtatgcataagatt
cctgtttctgttcctagagtcttttacctcaattcaagatctccaattactgaagaattt
atgggtaaacgtgttaacaagaatcttcctcatggaaggctgaattataacttatatgag
gtctcaattagtgaaattcaatatggggaagtgagcaaaaaacttgcaactcttctagcg
gatcctgatattgagggaatatatgaaacaaaggtgccactggagtttaatgcattaatc
cagcttggttgcgtatgtaaggtggataaaactgccaataaacgtagtctgcatgaacca
tggaatttgagtgaattgcacatgaagactacgacagaatgtgtttatcttgaacagtct
ttatccttcttttatttgtaccacagcatctctgagggacgggctatatatgttggatat
tttcctgcatcaaaagcaataactgttgtggtggttaatccctatcaaaacaaagattta
ttaccgacttttcttgaacgacaatttcatgatgcttgccaggctttgtctattgaccca
cctccgaggaatgacattaattttaaggtggactatgtggcccatgtcaaggatgctgaa
acagtgatgcaaagagcaataaatagtcacagtcacggaagggaaaatcatgtgcctatg
gttgctgtcattgaatgccctaatgttcaattagtaaaattgggcatccgtgctctagat
gattttccatgcctgagtgttccttacaatgcacgtgatagtcagtaccagattcttgga
tggcaacaaactgctggtaaagttggaatgcaacgttgtgctgcatcagtccgatggtta
aatgaaagaattgctctctcaagatatgcccatgtacccctggggaactttgaacttgac
tggctcatatttatggcagatatcttcttttcaagggcgttgcgtgataatcaacaggtg
ctttggatatctgatgatggccttccagatttaggtgggattaatggcgaacagaacttt
tttgttgatgaggtccaacaacctgttcttacatatcctggagcttatagaaacgtaact
gtggagttaaagatacaccacctggctgtaaatgctctactcaagtacagcctagttaat
gaaatggaaggaggcactctattaggatttggtcacgaacatgattctggagcattttct
atgaatgatcagaatggttttgatgagtctacctcttgtgcacatgcctttcgagtcctt
aagcagttgatccagcgttgcctagcagatgcagtgacatcaggaaatgtttatgctgat
tcaattttgcagcatctgtacagatggctttgcagccctaaatcaaaacttcatgatcca
gctctccatcagctactccacaaggtcatgcaaaaggtctttgcattattgttggcagag
ttccgcaagttaggtgctacaattgtatttgcaaacttcacgaagattattatagacaca
gggaaatatgatttgtctagagccaaagcttactgtgacagtttgctaagaactatacaa
tctagggatttatttgaatggattgagcttgaaccactacagttctggtgctcgttgcta
ttcatggatcagtataactacggtggaataccagtaaaatctgatgaagccatgaatgat
aaatcccaagtagacattatatcaagctggaacattgctgaatacttgccaaaaaaagtc
caagaccattttgttttcatcgtttctcaattcatgtatattccctggaattatgcacaa
aaccaagcacaaatcagggcctcatttaaggatggtgacacctgcactccatcaataagc
attggagctgcagctgcttttgaatcagaaataacagagtatatcaaagaacagattagc
tcttactttgcggacaaactgctgggaattgttcacgatattagtcttcatatgaagggg
gtgagcagatcagaaaacaaccagagtatatcaccaggccctgaattacacagaggggat
gctgccttggaatttatcaagcatgtctgtgctgtcctggctcttgaccaaagtgtgcag
catgaagttttggtgttgagaaagaatttgctaaaatatgttggtgttagagagtttgct
cccgaagccgagtttcatgatccttgtcattcattcgtcttatccaacgtcatatgcagc
tattgtaatgactgcagagatttggacttgtgccgggatttggctttattaactgaggag
tggcgttgtgctgtgccacagtgtgggcagccttatgaccgtgaggtgatggaaaatgct
cttcttcagactgtaagacaaagagaacgactataccacctgcaagatgtggtgtgtatc
aagtgccatcaggtgaaagctgcgcatttggcagaacaatgcgcatgtgcaggctcgttt
agttgcaaggaagatgcaaatgaatttcgtagaaagatgcaggttttctttaacatagca
tctcgtcagaaattccagcttctcctagagtgtacctcttggattttagaacttagataa

DBGET integrated database retrieval system