Vigna angularis (adzuki bean): 108340282
Help
Entry
108340282 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108340282 isoform X1
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108340282
03036 Chromosome and associated proteins [BR:
var03036
]
108340282
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108340282
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108340282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
UTP6_C
PRP6_TPR
HAT_Syf1_M
xRRM
UNC45-central
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
108340282
NCBI-ProteinID:
XP_017433037
LinkDB
All DBs
Position
5:complement(117586..131924)
Genome browser
AA seq
848 aa
AA seq
DB search
MDQNESLTLTAEAELTKDQAMPDSDEKMEENHPLTADDENHKDKAMSDSDDSDSEDEAQQ
NLLLESLQTELAANPSNYDGHLQYIKLLRRTGDVDKLIRAREAMSELFPLSPEMWHQWIK
DELSLSTASRPEAFSRILKLYERGVFDYLSISLWCDYINFVQEFDPMVRQCTPTGISKAR
DLFESALTAAGLHVAEGSKIWEAYRQYEQAILLTTDDTDAQAKEKQVQRIRSLFHRQLSV
PLADMSSTLTAYKAWEAEQRNLQDVETIDLVDIYPHVASSYQKALEMYNARFHLEEQILS
LNVSDSEKLQHYMIFVLQNYLKFEQSYGMPARIQVLYERAITDFPISLDLWLDYTRYLDN
TLKVGNIVSNVYSRATKNCPWVGELWIRYMLSLERGHTSEKDLSEIFEKSLQCTFSTVEE
YLDLFLTRVDGLRRRMTSSSKEDLEYKIIRETFERASDYLSPHLKNTEGLLHLYMYWARL
ETKLGKDVTAARGVWENCLKICGSMLQSWTGYIAMEVELGHINEARSIYKRCYSKRLSGT
GSEDICHSWLRFEREFGTLEDFDHASLKVTPRLEELQLFRIHQESKSAEENEKNLKRNAR
EKRKLGSDITEEPTPSKRLKDIGNTKKAPEENKYQQQNTSQVSKVEGVNWNNPSGQQFNH
EKNRAYSDKCTAFISNLHPTANYEHIRNFFSDVGGIVAIRILHDKFTGKSRGLAYVDFLD
DEHLAAALAKNKQKLIGKKLSIARSDPRRGGRESSNPKTLTEHADTFNHSGKKSAVSKET
DDAYKGDVKDAKFSSRKQENDNIQLRGKNTFAVPRNVRPLGFTANKPIAEDGDEKPKSNE
EFRKMFIR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaacgaatccctaaccctgaccgctgaagcagagctcactaaagaccaagct
atgcctgattccgacgagaaaatggaggaaaaccatcccctgaccgcagatgatgagaac
cacaaagacaaagccatgtctgattccgatgattctgattcagaagacgaagctcagcag
aatctcttacttgaatctctccagactgagcttgctgctaacccctctaattatgatggt
catttgcaatatataaagcttctgaggagaaccggtgatgttgataaactgataagagcc
agggaagctatgagtgaactttttccgttgagccctgaaatgtggcaccaatggatcaaa
gatgagctttctctcagcactgcttctcggcccgaggctttctctagaattctgaagctt
tacgaacgaggggtgtttgattatctgtctatctctctttggtgtgactacattaatttt
gtccaagagtttgatccaatggtacgccaatgtacacctactggtatttccaaggcgagg
gatctgtttgagagtgccctgactgcagctggtttgcatgttgctgaaggtagtaaaata
tgggaagcatacaggcaatatgagcaggctatacttttaaccaccgatgatactgatgca
caggccaaagaaaagcaagttcaacgtattcgtagtttatttcaccgccagttgtctgtt
ccccttgctgacatgagttcaacacttactgcctataaggcttgggaggcggaacagaga
aatcttcaagatgttgaaaccatcgacttggttgatatttatcctcatgttgcatcttca
taccaaaaggccttggagatgtacaatgctcgttttcatcttgaagagcagattttgagc
ctgaatgtttctgattcagagaaactgcaacactacatgatatttgtattgcagaactat
ttgaaatttgagcaatcatatggaatgccagccagaattcaagttctatatgaacgagct
attactgactttcctatatcacttgatctctggcttgattatactcgctatttggacaac
actttgaaggttggtaatattgtcagcaatgtttattctagggcaactaagaactgccct
tgggttggagaactttggattcgatatatgctttccttggagcgtggtcatacttcggag
aaagacttgtctgaaatctttgagaagtccctgcaatgtaccttttctactgttgaagag
tatcttgatttgtttcttacccgagtagatggcttaaggcgaagaatgacatccagcagt
aaagaggatttggaatataaaataattagggagacctttgagcgtgcgtcagattatctg
tcaccacacttgaagaacaccgagggtttactacatttatacatgtattgggctcgttta
gaaacaaaacttgggaaagatgtaactgcagctcggggagtgtgggagaattgtcttaag
atatgtggttcaatgttgcagtcatggactggttatatagcaatggaagtggaattaggt
cacataaatgaagcaaggtccatttacaagcgatgctacagtaaaagactttctgggact
ggttcagaggacatatgccattcatggttacgctttgagagggaattcggcacgttggaa
gattttgatcatgcatctctcaaggtaacccctcgactggaagaactacagttatttagg
atacatcaggaatccaagtctgcagaggaaaatgaaaagaatcttaagagaaatgctcgt
gaaaagagaaagctggggtcagatataactgaagaaccgactccatcaaagcgacttaaa
gatattggaaatacaaagaaagcacccgaagagaacaaataccagcagcagaatacttct
caggtgtcaaaagtggaaggggtcaattggaataacccaagtgggcaacagttcaaccac
gaaaagaacagggcatactctgacaagtgcaccgcttttatatcaaatcttcatcccacg
gcaaattatgagcatattcgtaatttcttcagtgatgttggtggaattgttgcaatccgc
atcctacatgacaaatttactggaaagtcaaggggattagcatatgtggactttttggat
gatgaacaccttgctgctgcattagctaagaacaagcaaaagttaatcggaaagaagtta
agtattgctcggtctgacccaaggcgaggtggacgggaatcttctaatcccaaaacattg
acagaacatgcagacacctttaatcattctggtaaaaaaagtgccgtttccaaagaaact
gatgatgcttacaagggagatgtaaaggatgcaaagttctcttctagaaaacaagaaaac
gataacatccagcttagagggaagaatacttttgctgtgcctagaaatgtcagaccactt
ggttttactgcaaataaaccaatagcggaagacggggacgaaaagccaaaatccaatgaa
gaatttagaaagatgttcattcggtaa
DBGET
integrated database retrieval system
