Vigna angularis (adzuki bean): 108340305
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Entry
108340305 CDS
T04660
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108340305
Spliceosome [BR:
var03041
]
Complex A
Other components
Complex A specific factors
108340305
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GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
RRM_7
PHD_4
Motif
Other DBs
NCBI-GeneID:
108340305
NCBI-ProteinID:
XP_017433077
UniProt:
A0A0L9V889
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Position
5:complement(40588288..40592311)
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AA seq
806 aa
AA seq
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MDALDSTPNLPPLHPYDPSPQNHAPSEYHNSSQQQSETGQNENGNGTSDGRPSENGQGPL
DNNGLHPQLSKPLLSEGLTRSGTDRDQSGGEEETTSKRRRRSRWDPQPESNDQSGQSGGE
LGSGPKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRP
EGARSPSPEPIYDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPADYRPPKLQ
KKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPD
PSENEDLHVLVEAETPESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEY
CRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAE
LGGSVPESATKQTSTLAIGAGTSGSNPPWANNSATAGGLAQAGLGAAAVKKEIDDTNLYI
GYLPPSLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAILAMNGY
RLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVQSQPLGAYPSQQYAAGGPLGTAPPGS
YGGTPVPWGPPVPPPYASYAPPPPGSTMYPPMQGQPMPPYGVQYPPPVQSGPPGAPSQSA
TSSELQQSYPPGVQSDSSTSTQSVAVNVYGNSVPSMPPAAQPTYPASYGYPPYYNAVPPP
PPPPAPIPVSTSDQSHNIANVPWANNSLVPPPASSADKTSYGTDQSLSIGNVPRTSNPPV
PPPPSSAEKTSYGADSEYEKFMGEMK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcgattcaaccccaaatctccctccactgcatccctacgatccttcaccg
cagaaccatgcgccatcagagtatcacaactcgtcacaacaacaatcggaaaccggtcaa
aacgaaaacggtaacggcaccagcgacggaaggccatcggagaatggccagggacctttg
gataataacggattgcatcctcagctttcgaagccattgctatctgaaggattgacgcgg
agcggcactgacagggaccaatctggcggcgaggaggagactacaagcaagcgccgccgc
cggagcagatgggatccgcagccagaatcgaatgaccagagcggccagagcggcggggaa
ttggggtctgggccgaaaaagaggaagtctcgttgggctgatgacgagcccaagccggtg
attcaacttcctgatttcatgggcggtattgaattcgatcccgagattcaggctttgaac
agtaggcttcttgagattagtcgaatgttacagtcaggtttacctttagatgatcgcccc
gaaggggctcgatctccttcgcctgagccgatatatgataacatgggcattaggattaac
actagggaataccgtgcgcgtgagagattgcaaaaagagagacaggaaataatatctcag
attataaagaagaaccctgccttcaagccacctgcggattacaggccacccaagcttcag
aagaagctttatataccgatgaaagaataccctggttacaatttcatcgggcttattatt
ggtcccagaggtaacacccagaagcggatggagaaagaaactggtgctaaaattgtgatt
cggggtaaaggatcagtgaaagagggtaggctacagcagaagagggatttgaagcctgac
ccttcggagaatgaggacttgcatgtgttggtagaggctgagacgccggagtcgcttgag
gctgccgctggtatggtggagaagctcttgcagcccgtggatgaggtattgaatgagcac
aagaggcaacaacttagggaactagctgcattgaatggtacgatcagggatgaggagtat
tgcaggctatgtggtgaaccaggtcatcgccaatatgcatgtcctactaggacttcgact
tttaagagtgaagttgtctgtaaacattgtggggatggtggtcatccaagcatagattgt
ccggtgaagggtgctactgggaagaagatggatgatgagtatcagaatttcttagcagag
ttgggtggttcggttcctgaatctgcaacaaagcaaaccagtactttggctattggagca
ggcacttctggaagcaatcctccttgggctaacaattccgctacggctggtggtttggct
caagctggcttaggggctgctgctgttaaaaaggaaattgatgatacaaatttgtacata
ggatacttgccgcccagccttgatgatgatggcctaatccaattatttcaacaatttggt
gaaattgtcatggcaaaagtgatcaaggatcgaatgtcgggtttaagtaaaggatacggt
tttgtgaagtatgctgatataacaatggcaaacaatgcaatattggccatgaacggttat
cgccttgagggtcgaacaattgcagtgagagttgctggtaagcctcctcagcctgttgtg
ccccctggcccaccagcgtctgctgtgcctacttatcctgttcaaagccagccactcggt
gcttatccgtcccaacagtatgctgccggtggcccccttgggactgctcctcctgggagt
tacggtggtaccccggtgccatggggacctcctgttcctcctccatatgcttcttatgct
cctcctccacctgggtcaaccatgtatccacctatgcaaggtcaaccgatgcctccatat
ggggttcaatatcctccgcctgtgcagagtggtcctcctggtgccccatcccagtctgca
acttctagtgaactgcagcagagttacccacccggagtgcagtctgacagtagtacctca
actcagtctgtagcagtcaatgtatatggtaactcggtaccttcaatgccacctgcagcc
caacctacttatcctgcatcttatggatatccaccttactataacgcagttcctcctcca
cctccccctcctgcccccattcctgtttcaacttcagaccaatcccacaacattgcaaat
gtgccttgggccaataattctcttgttccgccgcctgcttcatcggcagacaagacatca
tatggtacagatcaatcccttagcattggaaatgtgcctaggacctcaaatcctccagtg
cctcctcctccttcatcagctgagaagacttcatatggtgctgattcagagtatgagaag
ttcatgggagagatgaaatga
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