Vigna angularis (adzuki bean): 108340307
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Entry
108340307 CDS
T04660
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108340307
03083 Polycomb repressive complex
108340307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108340307
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108340307
Histone modification proteins
HAT complexes
HATB complex
108340307
HDAC complexes
Sin3A-HDAC complex
108340307
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108340307
PRC2.2
108340307
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108340307
Heterochromatin formation proteins
Other heterochromatin formation proteins
108340307
Chromatin remodeling factors
NuRD complex
108340307
NuRF complex
108340307
NuRF complex (fruit fly)
108340307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
108340307
NCBI-ProteinID:
XP_017433081
UniProt:
A0A0L9V7P0
LinkDB
All DBs
Position
5:38243545..38247145
Genome browser
AA seq
400 aa
AA seq
DB search
MAEEYNEGEVEEEFSVWKKNTPLLYDLFISHPLQWPSLTVHWLPSSPQPHSHPSFNVHKL
LLATHTAQGEPNFLMLADASLPADTSQPIVAADPADPVLPKVEISQKVAVDGEVNRARCM
PQNPAIVAAKTCNSEVYVFDFNKQRGSEFAPDSRLRGHDKEGYGLSWSPFKSGYLLSGSH
DHKICLWDVPAASQESVIDAVHVYEGHESVVEDVSWNMKDENLFGSVGDDFKLVIWDLRT
NKPQQSVKPHDNEVNFLSFSPYNQWILATASSDTSVGLFDIRKLEIPLHFLSSHTDEVFQ
VEWDPNHETVLASSGADRRLMVWDLSRIGDEQIEGDGEGGPTELLFSHGGHKGKISDFSW
NKSQPWVISSVAEDNSFHVWQMAENIYSDGDDDNMWTAND
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagtataatgaaggtgaagttgaagaagagttctccgtttggaagaagaat
actcctctgttgtacgatttgttcatttctcatcctcttcaatggccctctctcactgtt
cactggcttccttcctctccccaaccccactcccacccttccttcaatgtccacaaactc
ctcctcgctactcacactgcccagggcgaacccaatttcctcatgctcgccgacgcatcc
ctccccgccgacacctcacaacccatcgttgccgccgaccctgccgacccggttctaccc
aaggtagaaatttcccaaaaggttgctgttgacggggaggtgaatcgagcgcgttgtatg
ccgcagaaccctgctattgttgctgcgaagacatgtaattccgaggtttatgtgtttgat
ttcaacaagcagcgtgggagcgagtttgcccctgattcgaggttaaggggtcatgataaa
gagggctatggtttgtcttggagccctttcaagagtgggtatcttttgagtggttcgcat
gaccataagatttgcttgtgggacgtgcctgctgcttctcaagagagtgtgattgatgca
gttcatgtttacgagggtcatgagagtgtggttgaagatgtgtcctggaatatgaaggac
gagaatctgtttggatctgtaggagatgactttaaattggtcatttgggacttacggact
aacaaaccccaacaatcagtcaaaccacatgataacgaggttaactttctttcattcagt
ccatataaccaatggattttggctacagcatcttcagatacaagtgttggtctatttgac
attcggaagctggaaattccactacattttttaagtagccacaccgatgaagtattccag
gttgagtgggatcctaatcacgagactgtgttggcatcatctggcgctgacagacggctg
atggtttgggatcttagcaggatcggagatgagcagatagagggagatggtgagggtggc
cccaccgaattactcttctctcacgggggtcacaaagggaaaatatcagatttttcatgg
aacaaaagtcagccatgggttatctcaagtgtagctgaggacaattctttccatgtatgg
caaatggcagagaacatttacagtgacggcgacgatgacaacatgtggacggccaatgat
taa
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