Vigna angularis (adzuki bean): 108340452
Help
Entry
108340452 CDS
T04660
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03008
Ribosome biogenesis in eukaryotes
var03013
Nucleocytoplasmic transport
var03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108340452
03008 Ribosome biogenesis in eukaryotes
108340452
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108340452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108340452
03009 Ribosome biogenesis [BR:
var03009
]
108340452
03016 Transfer RNA biogenesis [BR:
var03016
]
108340452
03036 Chromosome and associated proteins [BR:
var03036
]
108340452
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108340452
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108340452
Pre-60S particles
108340452
Transfer RNA biogenesis [BR:
var03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108340452
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108340452
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
108340452
NCBI-ProteinID:
XP_017433338
LinkDB
All DBs
Position
5:complement(39571229..39583903)
Genome browser
AA seq
1077 aa
AA seq
DB search
MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVMHILQN
TQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIVQLSGNDASFRSERLYVNK
LNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMVILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPLPAYRNLTLQCLTEVAALQFGNYYDVQYVKMYNIFMVQLQSILPPTSDIPDAYT
KGSTEEQAFIQNLALFFTSFYKVHIRILESTQENIAALLVGLEYLINISYVDDTEVFKVC
LDYWNSLVSELFEPHRSLDNPAAAATLMGLQVPAMLPGMVDGHGSQLLQRRQLYAGPMSK
LRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVITQVGENEPFVSELLTGLPTTIMDLEPHQIHSFYESVGHMIQAESDAQKRDEYLQ
RLMELPNQKWMEIIGQAHQNVEFLKDQDVIRTVLNILQTNTSVASSLGTYFLPQISMIFL
DMLNVYRMYSELISKSITEGGPYTSRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKSAMIEDVPRIFEAVFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIIWAFRHTERNIAETGLN
LLLEMLKKFQGSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVETG
VVTEALWDVATGPYHYPSNSAFVREFTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTF
KNHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagaagctccgggatttgagtcagccgattgacgttcccctcctcgatgcc
accgtcgctgctttctatggcaccggatctaaagaagagagaaatgccgctgatcagatt
ctgcgtgacttgcaaaacaatcctgatatgtggttacaagtcatgcatattttgcaaaat
actcagaatctgaatactaagttctttgccttacaggttctagaaggtgtaattaagtat
agatggaatgcattacctgttgaacagcgagatggaatgaaaaatttcatctctgatgtc
attgtacagctttctggcaatgatgcttcatttcgatcagaaaggctgtatgtcaacaaa
ctcaacattatattagttcagattttgaagcatgaatggccagcaagatggcgaagtttt
attcccgaccttgtctctgcagctaaaactagtgaaacaatttgtgaaaattgtatggtt
atattgaaacttttgagtgaagaggtttttgatttttcaagaggtgagatgacccagcag
aagataaaagagcttaaacaatctttgaacagtgaatttcaactcattcatgagttatgc
ttgtatgtgttatcagcctcccaaaggaccgaacttattcgagcgactctctctacattg
catgcctttttatcatggattcccctgggttatatatttgaatcaccattacttgagaca
ctcctcaaatttttcccactcccagcatataggaacctaacactgcagtgtttaactgag
gtggcagcccttcaatttggaaattattatgatgtgcagtatgtcaagatgtataacata
ttcatggtccagttgcagagtatactcccaccaacttcagatattcctgacgcgtataca
aagggctcaactgaggagcaagcatttatacagaatctggcacttttcttcacatccttt
tacaaggttcacattcgtatcctggaatccactcaagagaatatagctgctttgcttgta
ggccttgaatatcttatcaacatttcttatgttgatgatactgaggtttttaaggtctgt
ttggactactggaattccttggtgtcggagctgtttgaaccacaccgaagtttggacaat
cctgctgctgcagcaaccctgatgggacttcaggtaccagcaatgctccctggtatggtt
gatggacacggttctcagcttcttcagcgccgacaactgtatgccggtcccatgtcaaag
ctgagaatgctcatgatatgtcgaatggcaaaacctgaagaagttctcatagttgaagat
gaaaacgggaacattgttcgtgaaaccttgaaagacaatgatgttcttgttcagtacaag
attatgagggagactcttatttatttatcacatcttgatcatgatgatactgaaaagcag
atgctgaggaaattgagtaagcagcttagtggtgaggattggacatggaacaatttaaat
acactatgctgggcaataggttctatatccggttctatgatggaagaacaggaaaacaga
tttttggttatggtcattcgtgacttattaaacctttgtgaaattacaaagggaaaagat
aacaaagctgttattgcaagtaatatcatgtatgttgtgggccagtatccaagattttta
agagctcattggaaattccttaaaactgttgtgaataagttgtttgagtttatgcatgag
acacatcctggagttcaggatatggcttgtgacacatttctgaaaatagtgcagaagtgc
aagcgtaaatttgtgatcactcaggttggggaaaatgaaccgtttgtgtctgagcttctg
acaggccttcccaccaccattatggatcttgaacctcatcaaatacattccttctatgaa
tctgttggtcacatgattcaggcagagtctgatgcgcagaagagagatgaatatcttcag
cgattgatggagctcccaaatcagaaatggatggaaattatagggcaggctcatcaaaat
gttgagtttttaaaggatcaggatgttatccggacagtgcttaatatattgcagacgaat
acaagtgttgcatcttctttagggacatatttcttgccccaaatctcgatgatctttttg
gacatgttgaatgtgtacagaatgtacagcgagcttatttcaaagagtattactgaaggg
ggaccttatacttctagaacatcctacgtgaaacttctacgttcggtcaagagggaaaca
ctcaagctgattgagacattcttggataaggcggaagaccaaccacaaattggcaaacaa
ttcgtgcctccaatgatggatcctgttcttggagattatgcgaggaatgttcctgatgct
agggagtcagaggttttgtcactgtttgccacaattgtgaataaatataaatctgcaatg
attgaagatgtaccacgcatatttgaagctgtctttcagtgcacacttgagatgattaca
aaaaattttgaagattacccagagcatcgcctcaagttcttctctcttcttcgtgccata
gctactcattgttttcctgcattaatctgcctgtcaagtcagcaattgaagcttgttatg
gactctatcatatgggcttttcggcacactgaaagaaatattgctgaaactgggctgaac
ctgttgttagagatgctaaagaagtttcagggctcagagttctgtaatcagttttatcgg
acatactttttgacaattgagcaagagatattcgccgtgttgactgatacttttcacaag
cctgggttcaaattgcatgtcttggtgcttcagcatttgttctgtttggtggaaactggt
gtcgtaactgaggctctttgggatgttgctactggtccatatcattacccaagtaattct
gcgtttgtacgagagtttaccataaaacttctaagcacctcatttcccaacatgaccgca
gcagaggttactcaatttgttaatggactcttcgagtcaaccaatgatctatctactttt
aaaaatcatatacgagattttcttatccagtccaaagaattttcagctcaggataacaaa
gatttatatgctgaagaggctgcggctcagagagagagagaacgacaaagaatgctttct
attcctgggcttattgctcctagcgaattgcaagatgaaatggtggactcgtag
DBGET
integrated database retrieval system
