Vigna angularis (adzuki bean): 108340453
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Entry
108340453 CDS
T04660
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108340453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108340453
03041 Spliceosome [BR:
var03041
]
108340453
03032 DNA replication proteins [BR:
var03032
]
108340453
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108340453
Spliceosome [BR:
var03041
]
Complex A
U1 snRNP components
Sm proteins
108340453
U2 snRNP components
108340453
Complex B
U1 snRNP components
108340453
U4/U6.U5 tri-snRNP components
108340453
Complex C
U2 snRNP components
108340453
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108340453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108340453
NCBI-ProteinID:
XP_017433339
LinkDB
All DBs
Position
5:31598700..31617437
Genome browser
AA seq
110 aa
AA seq
DB search
MLSMFKRLDARIKGKGASLGVGRGRAVAMRAKDGKSSQLEHVSIRDSKVRFIVIPDMLKN
APMFKRLDARIKGKGASLGVGRGRAVAIRAKAQAAGRGVAPGRGVPPVRR
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgctctctatgtttaagcgtttggatgcaagaattaagggaaagggtgcatcacttgga
gttggtaggggcagagcagttgcgatgcgagcaaaggatggaaaatcatcacaacttgag
catgtatctattcgagacagcaaagtcaggtttatagtcataccagacatgctaaagaat
gctcctatgtttaagcgtttggatgcaagaattaagggaaagggtgcatcacttggagtt
ggtaggggcagagcagttgcgattcgagcaaaggctcaagctgctggccgtggagttgca
cctgggaggggtgtaccaccagtgcggagatga
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