Vigna angularis (adzuki bean): 108340594
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Entry
108340594 CDS
T04660
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108340594
03036 Chromosome and associated proteins [BR:
var03036
]
108340594
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108340594
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108340594
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108340594
microRNA pathway
RISC loading complex
108340594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108340594
NCBI-ProteinID:
XP_017433568
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Position
5:complement(32892213..32898227)
Genome browser
AA seq
992 aa
AA seq
DB search
MSRRGSQHSDFNRPPQSSASSSTAGGRGRGRGRGRGHSAPSPPAQTSYPPPAQTSSAASL
APSTAAPPRAVAPVPASAGPGPSRPPPVQASPAPVSGSGAVTTTAPSPAVQSVTSALEKQ
LTLETSAPSSSKANRYPDRPGFGTEGRKIQIRANHFQVQVGVQEIYHYDVAITPEITSKK
VSRDVIDLLVRAHRESILGNRMPAYDGRKSLFTAGPLPFEIKEFKVKLGDNDEPGASATP
TSSRKKREREFRVTIRFASKTDLHHLIQFLSCRQLDCPQETIQALDVVLRATPSENFDVV
GRSFFSPALGPKGPLGSGTEYWRGYYQSLRPTQMGLSLNIDVSARAFYEAIPVLDFISKN
FRLDFRRPLPDQDRVKIKKALRGIKVQVNHGQNIRRYKVTAVTKEPLRALMFNDDTGTKK
SVVQYFQEKYNISLQYTQLSALQAGSDTKPIFLPMELCQIVAGQRYTKKLNEDQVTALLK
ATCQRPREREDSIRQIVRQSKFSADKFARHFDIQVREDLVTLDARVLPPPMLKYHGSGGE
SQVQPRMGQWNMINKKMIAGGTVEHWTCLNFSGRIHRDLSYQHCQDLAEMCNRKGMRFKE
SPALPITSSPSGQIENALVNLHKQCKQANVGLQLLIIILPDVKGSYGKIKRICETELGIV
SQCCQPKQLLKPNKQQYLENLALKINVKVGGTNTILNDALMRRIPHVSDVPTIIFGADVT
HPQPGEDSSPSIAAVVASMDWPFVTRYKGVVSAQKHRDEMIQDLYIGDPAGGIPHSGIIR
ELFRAFRNSTNRKPERIIFYRDGVSEGQFNQVLLYEMDAIRKACNSLEENYLPPVTFVVV
QKRHHTRLFPAVHGAGARDTTDKSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPT
HYHVLYDENKFTADELQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDASD
AGSSTGGKGVSASFEVKLPSVKGNVANVMFFC
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgcggctctcagcattccgatttcaaccgtccgccgcaatcctcggcttct
tcttccactgccggaggccgaggccgaggccgcggtcgaggtcgcggacattccgctccg
tctcctccggctcaaacatcctaccctcctcctgcacaaacttcatccgctgcttctctg
gccccgtctactgccgctcctccccgcgcggtggcgcctgtccctgcatcagcagggcct
ggtccatcccgccctccgccggtccaagcctcgccggcgccagtttctggatccggagcg
gttactacaacggcgccgtctccggcagttcaatcagttacttcggcgctcgagaagcaa
cttacattggagacgtcagcaccgtcgtcgtctaaggctaatagatacccagaccggcca
ggattcgggacagagggaaggaagatccaaattcgagcaaatcattttcaagttcaagtt
ggggtgcaagagatatatcactacgatgtggcgatcactccggagattacttcgaagaag
gtttccagagatgttatcgacttgttggttcgagcacaccgtgaatcgattctgggaaat
cgcatgccggcttatgatggacgaaaaagtctttttaccgccggaccactgccttttgaa
attaaggaatttaaggtcaaactgggagataacgatgaaccaggggcttctgccacccca
acttcttccaggaaaaagcgtgaacgtgagtttagggtcacgatacgatttgcttcgaag
actgaccttcatcaccttattcagtttctcagttgccgtcagttggactgccctcaggaa
actattcaggcccttgatgttgtgctgcgggctacaccttctgagaattttgatgtggtt
gggagatcctttttttctcctgcattgggacctaaaggaccgttgggtagtggaactgaa
tattggcgggggtattaccagagtcttcgcccaactcagatgggcctgtctcttaatatt
gatgtctcagctagggcattttatgaggccattcctgtccttgacttcatttcgaagaat
tttagactcgattttcgcaggcctttgcctgatcaggaccgagttaagattaagaaagct
ttgagaggaatcaaggtccaagttaatcatggacagaatattagacgttacaaagtcact
gcagtcacaaaagaaccgctcagagccttaatgtttaatgatgacactggaacaaaaaaa
tctgttgttcagtatttccaagagaaatataatatttcattgcagtatacacagctttct
gctcttcaagctggaagtgacactaagccaatttttttgcctatggagctgtgtcaaatt
gttgctggacagagatacactaaaaaattaaatgaggatcaagtgactgctcttttaaag
gccacatgtcagcgtcctcgtgaaagggaagactctatcagacagattgtgaggcagagc
aaattcagcgcggacaaatttgcccgccactttgacattcaagtgagggaggatctagtg
acacttgatgctcgtgtattacctcctcccatgcttaaataccatggatcgggtggtgaa
tcacaggttcaaccaaggatgggccaatggaatatgattaataagaaaatgattgctggt
ggtaccgttgaacactggacttgcctaaacttctctggaagaatacacagagatctgtca
tatcaacattgtcaggatttggctgaaatgtgtaacaggaagggaatgcggtttaaagaa
agtcctgcactaccaatcacatcatctccaagtggtcaaatagagaatgctcttgtgaac
ctgcataagcagtgtaaacaggcgaatgtagggctccaattgttgattataattttacct
gacgtcaaggggtcgtatgggaaaataaagcgcatatgtgaaacagaattaggaatagta
tctcagtgttgtcagcccaaacaattgttaaaaccgaacaagcagcaataccttgaaaat
ctggccctcaagataaatgtgaaggtgggtggtacaaacacgatattgaatgatgcactt
atgcgtagaatacctcatgtctccgatgtaccgacgataatatttggtgcagatgttacg
catccccagccaggggaggacagcagtccttccattgctgcagtggtggcatccatggat
tggccttttgtaacaaggtacaaaggagttgtttctgcgcagaaacatagggacgaaatg
atacaagatctttatattggagatccggcagggggaattccacattcaggaattatcagg
gagttgtttcgtgctttccgaaattcaactaatcgtaaaccggagagaattatattctac
agagatggtgtaagtgaaggacagtttaatcaagtgcttctctatgaaatggatgccata
agaaaggcttgtaactctttagaagagaattatttacccccagttacttttgtggtggtc
caaaagaggcaccacactcggttgttccctgctgttcacggagcaggagcacgtgatact
acagataaaagtggaaatataatgccaggtactgtagttgatacaactatatgtcatcct
cgggaatttgacttttatctgaatagtcatgctggaattcaaggaacaagccgaccaact
cattaccatgtattgtatgatgagaataaatttactgctgatgagttgcaaattttgacc
aataatttgtgttacacctatgcaaggtgtactcgatcagtttcaatagttcctccagca
tattatgcccatttggccgcattccgtgctcgctattacattgaaggtgacgcatcagat
gctggttcttcaactggaggcaagggtgtttcagccagctttgaggttaaattgccatcg
gtgaagggtaatgtcgccaacgtgatgtttttctgttga
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