Vigna angularis (adzuki bean): 108341469
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Entry
108341469 CDS
T04660
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X2
KO
K14829
pre-rRNA-processing protein IPI3
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108341469
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108341469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IP5PC_F
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
VPS11_N
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_like
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108341469
NCBI-ProteinID:
XP_017434636
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Position
1:13930292..13932597
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AA seq
337 aa
AA seq
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MLKTWRAHKKCLNCMLFSFDNSLLISSSDDGMICVWSMISLLDIEETRSSPPPLHCLSGH
ISSITGLLTAPNSYHSILISSSLDGTCKVWDFISGKHMQTQAYPFAITSIALHQRESLLF
CGTEKGIIFVEKLDVGRGEGPFLVIKGQPLELKGHSGAITALTSSRSSLISASEDCSICV
WDIFSWEITRRFSLHKGKVTNLVVVSRSSLLSTSKNRRVSNEYIISPLDKYPQLSNSIKG
TLHSSLYRGKTCIDLKSSELLKQKIFDTQKVDVPTITTLQMRVEASVKNHVWATNMTNHV
MVINKQLKSTLLGMMQHRLFRPNNTNLRKTSRKKPKI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagacttggagggctcataaaaaatgtttaaactgcatgttattttcatttgac
aattctcttctcatttctagctcagatgatggaatgatttgtgtttggtccatgattagt
ttgttagacatagaagaaacgagaagttcgccgcctccattgcattgtttgtcaggacat
atatcctccataacaggtcttttaacggcaccaaatagttaccactcaattttaatatca
agttcccttgatggcacgtgcaaggtttgggattttatctcaggaaaacatatgcaaact
caagcttatccttttgccataacttccattgcccttcaccaaagagaaagtcttttgttt
tgcggaacagaaaaaggaataatatttgtcgagaagctcgatgttggtcgtggagaaggt
ccttttcttgtcattaaagggcagccacttgaactgaaaggacacagtggagccattact
gccttaacctcatctcgatcatccctaatatctgcctctgaagattgttcgatttgcgtt
tgggacatctttagttgggaaatcactcgaaggtttagtctccataaagggaaagtaacc
aatcttgtggtggtttcacgatcttcgttgctttctacatcaaaaaacaggagagtctcg
aatgaatatattatttctccacttgacaagtatccgcaattgtccaactcaatcaaggga
actctccattcctcattatatagaggaaaaacttgcattgatttgaaaagttctgaatta
ttgaaacagaagatttttgatacacagaaagtagatgtaccaacaatcacaaccttgcaa
atgagagtggaagcaagtgtaaagaatcatgtatgggcaacaaacatgacaaaccatgtc
atggtgataaacaaacagttgaagtcaacactgttaggcatgatgcaacatagactgttt
cgtccaaacaacaccaacttgcgaaaaactagtagaaagaaacccaaaatttag
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