KEGG   Vigna angularis (adzuki bean): 108341657
Entry
108341657         CDS       T04660                                 
Name
(RefSeq) uncharacterized protein LOC108341657
  KO
K14315  nucleoporin NDC1
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108341657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108341657
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108341657
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 108341657
NCBI-ProteinID: XP_017434802
LinkDB
Position
6:complement(33455026..33458441)
AA seq 490 aa
MMMSGSRGRLELVVKNRLMSFLIWQSISSAIVFLHFLCFPFSPPHYPFFSFIVFLSSNLL
FSPTLSFLSSPNPRPRLPLSLLFATAAAFSAALCLPATTLTSSTLPRSILRGFLTGSLFA
SHYLFQRRWLLHFPIIQRPPFFSFKMGVPSAARKAFKLSFLASVISGVLLELLPHPFKYA
VATPRFFVEQISSLATTFVIFFSWELTHHLHWVLHTKRSIFAPPKGSAAAETNPSEHLLS
ALEETNPTSLLRYLAHLDLCMVCENNVDTWRRAGFFEETGETYKRVVAVCLKPLEHLATK
LGEGSGNSVDKATQLSNQLLSPTDLKNVEELYNFQLYAWCSRSVASLTACSRKEDKFGVA
QLSGSNAAVVSTLLSCLLAVENFMGKKTNLQPSNQLLGPAGIKWATVNSGRVDVAAGKRR
SGPVNSKAYAIADVLKTSIYQIVSAFQDEMSAGAKANLLEKDWITTGKPVFGTREMLIQK
LRIFLDFRAT
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgatgatgtctgggagcagaggaaggttggagttggtggtgaagaaccggttgatgagt
ttcttgatctggcaatccatttcatcagctatcgtcttcctccattttctctgctttccc
ttctctccacctcactaccctttcttctccttcatcgtcttcctctcctccaacctcctc
ttctcccccaccctctccttcctctcctcccccaacccccgcccccgcctccccctctct
ctcctttttgccaccgccgccgccttctccgccgccctctgcctccccgccaccaccctc
acctcgtccactctcccccgatcaatcctccggggcttcctcaccggctccctcttcgct
tctcattaccttttccagcgccgatggctcctccacttccccatcatccagcgtcctccc
tttttcagcttcaagatgggtgttccttccgctgctcgaaaagccttcaagctttccttt
cttgcttccgttatatccggtgttctgttagagcttctcccgcatccgtttaagtacgcg
gtcgccactccaagattcttcgtggagcagatatcctctcttgctaccacttttgttatc
ttcttctcttgggagttgactcatcatttgcattgggttttgcacactaagaggtccata
tttgcacctccaaaaggatcggcagcagcagaaacaaatccaagtgagcatctcctttca
gccttggaggagactaatcctacatcgcttctaagatatcttgcacatcttgatctgtgt
atggtttgcgagaacaatgttgacacttggaggcgtgcggggttttttgaagaaaccggt
gaaacttacaaaagagtagttgctgtgtgcttgaagccgttggaacaccttgcaactaaa
ttaggtgaaggctcaggaaattctgttgacaaagctactcaattatcaaatcagctgttg
tcccccacggatttgaagaacgtggaagaactgtacaacttccagctatatgcatggtgt
tcaaggagtgttgcttcactgactgcctgttcacgtaaagaagacaagtttggggttgct
cagctttccgggagtaacgctgctgtggtttcaacacttctatcctgccttctggctgtt
gaaaatttcatgggaaagaaaacaaacctgcaaccctcaaatcagttgctgggacctgct
ggtatcaaatgggcaactgtgaatagtggaagagtagatgttgcagctggtaaaagaaga
agtggcccagtgaattcaaaagcttatgctattgctgacgttctgaagacttcaatctac
caaatagtctctgcattccaagatgaaatgtcggctggtgctaaagcaaatcttctggag
aaggactggatcaccactgggaagcccgtttttggcactcgggagatgctaatacaaaaa
ttacgtatttttcttgattttcgagctacctaa

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