Vigna angularis (adzuki bean): 108341789
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Entry
108341789 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108341789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108341789
03036 Chromosome and associated proteins [BR:
var03036
]
108341789
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108341789
Coactivators
SAGA/TFTC/STAGA complex
108341789
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108341789
STAGA complex
108341789
TFTC complex
108341789
SAGA complex
108341789
SLIK complex
108341789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
108341789
NCBI-ProteinID:
XP_017434929
UniProt:
A0A8T0K906
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All DBs
Position
6:17970231..17975651
Genome browser
AA seq
536 aa
AA seq
DB search
MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSMRTFLSTED
VDTALALRNLEPIYGFTSNDPPRFKRAAGHKDLFYIDDKDVDIKDLIEAPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPVEAPPSEIRKSEYKEDGLSVDVKLPVKHLITRELQLYYEKI
TYLTLNKSGSIPFRRALVSLATDSGLHPLVPYFTCFVADEVARNLHNLAVLFALMRLVRS
LVQNSQIHIELYLHQLMPPIITCLVAKRIGSRLSDDHWELRNFSANLVASICQRFGHIYH
NLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRIIHLLILPNLEPYLHLLEPEMQP
EKQNNEMKRHEAWQVYGALLGAVGKCVHEKVKNFSNLFSPPTRLTSRGSGKAIIPMSGKR
KASADNLMQQQPPMKKLSTDGHGGVIPMNSMSVDMKGSTGGFSTMMGAPVMSMASQISTD
KAAGREVIDEQRKVSATLAQAWKDDIDAGNLVSSVVELFGERVLPFVPNPEAFMFL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtgccaaaggagacaatcgaagtcatcgcacagagcatcggcatcaccaat
ttgtcccccgatgttgccctcgctctcgcccccgatctcgaatatcgcattcgtgaaatc
atgcaggagtcgataaaatgcatgcgccattcgatgagaacttttcttagtacagaggat
gtggatactgcacttgcattgagaaatttggagccgatatatgggttcacctctaatgat
cctccgaggttcaaaagagctgctggacataaggatttgttctacatcgatgacaaagat
gtggatatcaaagatcttattgaagctcctttaccgaaagcaccccttgatacatcaatt
accagtcactggttggctattgaaggtgtgcaacctgcaattcctgaaaacgctccagtt
gaagctcctccctctgagatacgaaaatctgaatataaggaagatgggctttctgttgat
gttaaattacctgttaaacatttaataacaagggagcttcagctctactacgagaaaata
acttaccttacattaaataagtctggatccattccgttcagaagagcattggttagcttg
gcgacagactcaggactccatcccttagttccatatttcacatgttttgttgccgatgag
gtggcacgtaatttacataatttagctgttttatttgccttgatgcgccttgtgcggagc
cttgtgcaaaattctcagatacacatagaactttatttacatcaattgatgccacctatc
attacttgccttgttgcaaaaaggataggaagcagactatctgacgatcattgggagctt
aggaacttcagtgctaatcttgttgcttcaatatgccaaagatttgggcatatttatcac
aatctgcagccacgtgtgacaaagacatttcttcattctttcttggaccctacaaaagct
ctgcctcagcactatggtgcaattaaagggatagaagctcttggatcaagaattattcac
ttgcttatacttccaaatctcgagccatatttgcatcttcttgagccagaaatgcaacct
gagaaacaaaacaatgaaatgaagaggcatgaagcttggcaggtttatggagctttgttg
ggtgcagtaggcaaatgtgtgcatgaaaaggtaaaaaatttcagcaatttgttctctcct
ccaactcggcttacttcaagaggcagtggaaaagccattattccaatgtcaggcaaacga
aaagccagtgccgacaatctgatgcagcagcaacctccaatgaagaaactttcaacagat
ggccatggaggtgtaataccaatgaactctatgtcagttgacatgaaaggctcaacagga
ggattttccaccatgatgggggctcctgtgatgtcgatggctagtcaaatttcaaccgac
aaggcggcagggagggaggttatagatgaacaaaggaaggtgtctgccactcttgctcag
gcttggaaggatgacattgatgcaggaaatttggtgtcatcagtggttgaattgtttggc
gaaagggtgttaccatttgttccaaaccctgaagcatttatgtttttgtag
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