Vigna angularis (adzuki bean): 108341798
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Entry
108341798 CDS
T04660
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108341798
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Other 90S particles
108341798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
VPS8_N
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
eIF3a_PCI_TPR-like
Motif
Other DBs
NCBI-GeneID:
108341798
NCBI-ProteinID:
XP_017434940
UniProt:
A0A0L9VDN2
LinkDB
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Position
6:complement(29874133..29877694)
Genome browser
AA seq
501 aa
AA seq
DB search
MPRKKKSHDPFFTNDSRKRQKPNGKLDRDDEEDAEIESDFDEDGFFAGVDDGSGEDQEVE
TGAEARKRIAQDYIQMVRQIAQKEKEQKDGEEDEDGDGEDEEGARDSLVAQKLIKEQQEE
SGRVRRSIASKVKVSSDEGFRVLVKHRQSVTAVALSEDDSKGFSASKDGVIMRWDVNSGQ
FERYKWPSESVLKSHGLKDPQGSAAKQSKHVLALAASSDGRYLATGGLDRHVHIWDTRTR
EHVQAFPGHKGPVSCLAFRQGTSELFSGSFDRTIKIWNVEDRTYMNTLFGHQSEVLSIDC
LRKERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVNNEELLSGSDDGSIELWTV
MRKKPIYILRNAHALLVDSMKSDQKDSEKLPNGNIENGYHHPENHHCASVLSWVSAVTVC
RNSDLAASGAGNGSVRLWAVESDTKDIKPLHNVPLVGFVNTLAFAKSAEFLIAGVGQEPR
LGRWGSNPEARNGVSILPLKL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaagaagaaaagccatgaccccttcttcaccaacgattcccgaaaacgccaa
aagcccaatggcaaacttgaccgcgacgatgaagaggatgccgagatagaaagcgatttt
gatgaagatggcttcttcgccggcgtcgacgacggctccggtgaggatcaggaggtagaa
acaggcgcggaggctcggaagagaatcgcacaggactatatccaaatggttcggcaaata
gcgcagaaagagaaagaacaaaaggacggtgaggaggatgaagatggtgatggagaagac
gaagaaggagcaagagactctctcgtagctcagaagttgataaaggagcaacaagaggaa
agtgggcgcgtcagaagaagcattgcttcaaaggtgaaagtaagtagcgatgaagggttt
agggtgttggtgaagcacagacagagcgttacagcggtggccctgtctgaggatgattcg
aagggcttttccgcgtcgaaggacggagtaattatgcggtgggatgtgaacagtgggcaa
tttgagcggtataagtggcccagtgagtccgtgttgaaatctcatggcttgaaggatccg
caaggctcggctgcaaagcaaagtaaacatgtattggctttggctgctagctcggatggt
aggtatttggcgactggaggacttgatcgccatgttcatatatgggatactcgtaccaga
gagcatgttcaggcttttccaggtcataagggccctgtttcttgtctggcttttaggcag
ggaacttcggaacttttttcaggttcatttgataggacaattaagatatggaatgttgaa
gacagaacttacatgaatactttatttggtcaccaaagtgaagtattaagtattgattgc
ttacgcaaagaaagggtactaactgctggacgtgatcgtagcatgcaattgtttaaggtt
catgaagagtcacgtcttgtatttcgtgctcctgcatcctccttggaatgctgttgtttt
gttaataatgaggaactcttgtctggttcggatgatggaagcattgagctttggactgta
atgcgaaagaagcctatttacattttgaggaatgctcatgccttactggtggatagcatg
aaatctgaccaaaaggacagtgaaaaacttcccaacggtaacatagaaaatggttaccac
catcctgagaaccatcattgtgcgtcagttttgtcttgggtcagtgcagtcactgtttgt
agaaacagtgaccttgcagcatctggggctggcaatggttctgttcgattatgggcagtt
gaaagtgatacaaaagacattaaacctcttcataatgtgccattggttggatttgtgaat
accttggcttttgcaaaatcagcagaattcttaattgcgggagttggacaggaacctcgt
ctcgggaggtggggaagtaaccctgaagcacgaaatggagtttcaattcttcctcttaag
ttgtga
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