KEGG T04660: 108342332

Vigna angularis (adzuki bean): 108342332

Entry

108342332         CDS       T04660

Name

(RefSeq) DNA-directed RNA polymerases IV and V subunit 4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

var Vigna angularis (adzuki bean)

Pathway

var03020

RNA polymerase

var03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:var00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108342332
  09124 Replication and repair
   03420 Nucleotide excision repair
    108342332
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:var03021]
    108342332
   03400 DNA repair and recombination proteins [BR:var03400]
    108342332
Transcription machinery [BR:var03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     108342332
DNA repair and recombination proteins [BR:var03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108342332

SSDB

Motif

Pfam:

RNA_pol_Rpb4 VPS15-like_hel

Other DBs

NCBI-GeneID:

108342332

NCBI-ProteinID:

XP_017435579

UniProt:

A0A0L9VE13

LinkDB

Position

6:complement(30479964..30483504)

AA seq 209 aa
MSEKGGKGASLLSKGGLGSMKGKDDSATKSAKGRRVQFSKDGPYESGISSSSPISLKSVG
KGGKGDKVANGGKSSQSKDSQSSELDQKLPENIKCLMDCEAADILQGIQDQMVMLSRDST
IKMPTSFDKGLQYARSTSKYTNAQSVRHVLEPLANNGLSDCETCVIGNVCPESADEVFAL
LARLKGKRNVDKEVLKDSLIELAKLRQPM

NT seq 630 nt +upstreamnt +downstreamnt
atgtcggagaaaggaggaaagggcgcttctctattaagcaaagggggactaggatccatg
aaagggaaagatgacagtgcgacaaaatcagcgaaagggaggagggttcagttttctaaa
gatggtccatatgaatctggaataagtagtagttcacccatttcactaaaatctgttgga
aaaggaggaaaaggagataaggttgcaaatggaggaaagagctctcagtcaaaagactca
caatcatcagaactggatcaaaaacttccagaaaatatcaagtgtcttatggactgtgag
gctgcagatattttacaaggaattcaggaccagatggtcatgttatctagagattcaact
atcaaaatgcccacgtcatttgacaagggactgcagtatgccagaagcactagcaagtac
acaaatgcacagtctgttagacacgttcttgaacctcttgcaaataatggtctcagtgac
tgtgagacatgtgtgattggtaatgtatgcccagaatctgctgatgaagtttttgctctt
ctcgcaagattgaagggtaagagaaacgttgacaaggaagttcttaaagattcattgatt
gagcttgcgaagcttagacagccaatgtag

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