Vigna angularis (adzuki bean): 108342364
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Entry
108342364 CDS
T04660
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108342364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108342364
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108342364
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108342364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
108342364
NCBI-ProteinID:
XP_017435615
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All DBs
Position
6:complement(28853644..28858740)
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AA seq
534 aa
AA seq
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MQNAAIKRVNVSSLKTGSAQQKKSKKTDRRSNFGKRFLSSCMEFQSPTSRPTSSDVVLNH
HPPFPIIHQFLLPPPLLPTPSTVLLPVPFNPSLFFTMDNQRSISLLQFMVDEGLVPSAEE
EDKRKSVIRKLKQVVSSWIKKVACLHQLPDHQIAVTSATVLTYGSYGLGVHSSGSDIDAL
CVAPFFASIAEDFFIVLHDMLKRRPEVSYIHCVKSAKVPLMRFKFEGVSIDLPYARLNVL
YVPENVDILNPFFMRNIDDTSWKSLSGVRANKYILHLVLNIEKFQCILRCLKLWAKRRGV
YGTSLGYLGGVHMTVLAAYVFLRHPDATLNALIMHFFQTFAFWPWPTPVMLQEGMLTVID
GIETRSYMPIFLPSSRYEHCHTNITKSTFFRIRSEFLQGHEMTKDILKPDFLWDNVFEPF
PYTERYSRFLKICLSSPNHYALVEWVGWVKSRFRGLLLHLEATQGFCDPNPTEYVDSEKT
EPNVVFYWGLKSNKNNFLDIDSVKGEFMKIIKNGYEGSPGRMEMSILLASQLPN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgctgccattaaacgcgtgaacgttagcagtttgaagactgggagtgcacag
caaaagaaaagcaagaagacagatagaagaagcaatttcggaaagaggtttttgtcatct
tgcatggaatttcaatccccaacttctcgccctaccagcagtgatgtcgttttgaaccat
catccaccatttccgatcattcaccagtttctgttgccgccgccgctgctgccaacgccc
tccactgtgctgcttccggtacctttcaacccctcacttttcttcacgatggataatcaa
aggtccatatctctgcttcagttcatggttgatgaaggacttgttccgtctgcagaagag
gaagataaacgaaaaagtgttattcggaagcttaaacaggtagtctcatcgtggatcaag
aaggttgcatgcctgcatcaactaccagaccaccaaattgctgtaacatctgccacagta
ttgacttatggatcttatggcctcggagttcacagttcaggttctgacattgatgctttg
tgtgttgctcctttctttgcgtcaattgcagaagacttttttattgtgttgcacgacatg
cttaaaagaagacctgaagtatcatatattcactgtgtcaagagtgcaaaagtccctcta
atgcgatttaaatttgaaggggtttccattgatcttccatatgctcggcttaacgtacta
tatgttcctgagaatgttgatatattaaatccatttttcatgaggaatattgatgatacc
agctggaaaagtttgtctggggtacgagcaaataaatacattctccatctagttcttaat
atagagaaatttcaatgcattctacgatgtcttaaactgtgggcaaaaaggcgaggagtt
tatggaacttcgcttggttatttgggaggagttcatatgacagttcttgcagcatatgtt
tttctgagacaccctgatgccaccttaaacgctctaattatgcacttttttcaaacattt
gcgttttggccctggcctacaccagtgatgttgcaggaaggaatgttaacagttatagat
gggatagagacacggtcctacatgcctatatttctgccatctagccgctatgagcattgt
catacaaatattactaaaagcactttctttcggatcaggagtgagtttcttcagggacat
gaaatgacaaaggatattttgaagccagatttcctctgggataatgtattcgagcctttc
ccatacacagaaagatactcccgatttctcaaaatttgtctctcttctcctaaccattat
gcactggtagaatgggttggctgggtaaagtcacgctttcgaggtcttcttttgcatctg
gaggctactcaaggattttgtgaccctaaccctacagaatatgttgatagtgagaaaaca
gagccaaatgtagttttctattggggtttgaaatctaacaagaataatttcctggacatc
gattcggtaaagggggagttcatgaagattataaagaatggctatgaaggttctcctggg
aggatggagatgtccatcctgttagcttctcagctgccaaattga
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