Vigna angularis (adzuki bean): 108342803
Help
Entry
108342803 CDS
T04660
Name
(RefSeq) endoribonuclease Dicer homolog 2 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108342803
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108342803
microRNA pathway
RISC loading complex
108342803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
DEAD
ResIII
PAZ
Dicer_dimer
Cas3-like_C_2
dsrm
SNF2-rel_dom
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
108342803
NCBI-ProteinID:
XP_017436098
LinkDB
All DBs
Position
6:29648153..29669563
Genome browser
AA seq
1388 aa
AA seq
DB search
MKEVLSKEIDTHSQQGEITGDVLPFARSYQLEALDKAIRENTIVYLETGSGKTLIAIMLL
RSYAHHLRKPSPFIAVFLVPQVVLVSQQAEVVKMHTDLKVGTYWGDMGVDYWDGATWKQE
TEKHEVLVMTPVILLNCLRHSFFKLNMIKVLIMDECHHARGKHPYACIMTEFYHHQLKCG
ISDLPRIFGMTASPIKSKVGSSDSSWSENVRKLMTLMHSKVYTCSEAVITEFMPTSTPVF
KFYRDSGIQFVLFEELESKLKMLKEQHELTLQSSDFTRSVAESAQKRITKIFCALMFCLD
ELGVWLALKAAEFLSSNEFDSFSWGHSGDKVVKNFILAVVHTLKSYFQCDPQWSIGDNVD
SDVEMGLLTSKVCCLIDSLLEYRALIDMRCIIFVERIITAVVLQDLLNTLLPKYSSWKIK
FIAGHNFGLQNQSRRKQNEIVEEFRMGLVNIIVATSILEEGLDVQSCNLVIRFDPSPTVC
SFIQSRGRARMRNSDYILIVKSGDSVTRSRLEKYLASADIMRKESLHHSSLPCDPFEGEE
YDKESYRVASTGAIANLSSSISLIYLYCSRLPADGYFKPTPRWDRETNTLYLPKSCPLQP
IRVEGDQKLLKNIACLEACKQLHKIGALTDYLVPDVFIEEAEMEEFGNEPYDENQPAYVP
FGLVNCVSNNSHTTYHCYLMELSQNFSYDISVQDIFLATRIVLDPEIGCTQFDMGFDRGS
LSVKLIYKGTIDLSPDLVLLCKKFQVTLLRILIDNSMNNLAMGLDKCCLEGGVEIDYLLL
PAIGKGEKSIVNWLAINAVNPSNIMCEYHPLCIRTKSGIVCTCRLQDALVFTSHAGDRIH
FYITTGTTELDGNSPMKLRDGGVTTYKKYYKQKHHVQLQYEDQKLIKARHKFPVKNYIHG
YKQGKEGEASKASVELPPELCSIVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHL
DHCAQYEIPTIKVLEAITATSCKEAFHYESLETLGDSFLKYAVSQQLFSSYENIHEGLLS
IKRKKIISNAALCKLGCRSGLPGFIQNEPFDPHTWTVPGDKSRGFKLKELVSGGKKIYVM
GERKLNRKIIADVVEALIGAFLSSGGEKAALLFMDWVGIKVSFNKIPYERHFDIQPEKQV
HVNHLESQLKYSFNDRTLLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITWHLYNRY
PGMSPGQLTDMRSASVNNDCYAWSAINHGLHKHVLHASQELHKHIAVTLVNFDKLSSAST
FGYGSETSLPKVLGDIIESLAGAILVDSGYNMEVVWQSIKPLLEPLVTPETLRLHPVREL
NELCQKRSYNIIQEDVSRKDGVTRFKMEVEADGVIHQHEYIGSALKGTAKKIVCKEILNS
LKEVRGAL
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggttctttcaaaggaaatagatacccattcccagcagggagagattactggt
gatgttctcccgtttgctagaagctatcaacttgaagcattggacaaagctattcgtgag
aatactatagtgtacttggagactggttcaggcaagactttgatagccatcatgcttctt
cgtagctacgctcatcatctgcgcaagccttctccttttattgcagtgttcttggttccc
caagttgtgttggtctctcaacaagctgaagttgtgaaaatgcatactgacttgaaagtg
ggaacgtattggggtgatatgggagttgattattgggatggtgctacctggaaacaagaa
acggagaaacatgaggtgcttgtcatgactcctgtgatattgctgaattgcttgcggcat
agcttcttcaaactgaacatgattaaggttttaataatggatgaatgccatcatgctagg
ggtaaacacccttatgcgtgcatcatgactgaattttatcatcatcaattaaagtgtggt
atctctgaccttcctcgaatttttggaatgactgcatctccaattaagtcaaaagttgga
agttctgattcatcctggtcagagaatgtacggaaactaatgactctaatgcattcaaag
gtatatacatgtagtgaagctgtcatcacagagttcatgccaacatcaacaccagtattc
aagttttacagggacagtggaattcaatttgtattatttgaagaattggaatctaaactc
aagatgttaaaagaacagcatgaactcactttacaaagttcagatttcactagatcagtt
gctgagtctgcacaaaaaagaataactaagattttttgtgctttaatgttttgcctggat
gagcttggtgtttggctggctttgaaggcagcagaatttttatcttccaatgaatttgat
tcattttcatggggacactctggggataaagttgttaaaaactttattttggctgtcgta
catacactgaaaagttactttcaatgtgatcctcagtggtccattggtgacaatgttgat
tctgatgtggagatggggctgttgacctccaaagtttgttgccttattgactctctactt
gagtacagggctttgattgacatgagatgcataatttttgtggaaaggattattacagct
gttgtccttcaggatctgttgaatacccttcttccaaaatacagtagctggaagattaaa
ttcattgcaggacacaattttggattgcaaaatcagtctaggagaaaacaaaatgaaatt
gtggaagaatttcgaatgggattggtcaacatcattgttgcaacatcaattcttgaagag
ggtttagacgtacaaagttgtaatttagtcattagatttgatccatctccaacagtgtgt
agtttcatacagtccagaggacgtgccaggatgagaaattcggattacatattaattgtt
aagagtggagattcagttactcgttctcggctagagaaatatcttgctagtgcagatatt
atgaggaaggagtctttgcaccattcttcccttccttgtgatccttttgaaggtgaagaa
tatgataaagagtcttatcgtgttgcaagtactggagccattgcaaatcttagttctagc
ataagtttaatatatttgtattgctcacgactccctgcagatgggtacttcaaaccaact
ccaaggtgggacagagagactaacacattgtatcttcccaagagctgccctctacagcct
attcgagttgaaggtgaccaaaaactcttaaagaatattgcatgccttgaagcatgcaaa
caactgcataagattggagctctgacagattatcttgttcctgatgtcttcattgaagaa
gcagagatggaggaatttgggaatgaaccttatgatgaaaaccaaccagcttatgtgcca
tttggattggtaaattgtgtgtcaaataatagtcacacaacataccattgttatttgatg
gagttaagtcaaaattttagctatgatatctctgttcaagatatttttcttgccacaaga
attgtgcttgatccggaaattggatgcacacaattcgatatgggttttgacagaggtagc
ttgtcggtgaagttgatatacaaaggaaccattgatctttcacccgatctggttctttta
tgtaagaaatttcaggtcactttgcttagaattttgatagataatagtatgaataatttg
gcaatgggtttagacaaatgctgtttggaaggtggtgttgagattgattatctcttgctt
ccggctattggcaaaggggaaaaatcaattgttaattggttggctatcaatgcggtaaat
ccatctaatattatgtgtgagtatcatccgctctgcattaggacaaaaagtggtatagtt
tgcacttgtagactacaagatgctttggtgtttacttcacatgctggtgataggattcat
ttttatatcacaactggtacaacagaattggatggaaactctcctatgaagctaagggat
ggtggagttactacttacaagaagtattacaaacaaaaacatcacgttcaattgcaatat
gaagatcaaaaactcattaaagcaagacacaaatttccagttaaaaactatattcatgga
tacaaacaagggaaggaaggagaagcaagcaaagcctctgttgaattaccccctgaactg
tgctctattgtcatgtcgccaataaaagatagtatcatttataccttctcgtttattcca
tcaattatgcatcggcttgaatcattgcttggagctttcaatttgaaaaagatgcatttg
gatcattgcgcacaatatgaaattcctacaatcaaggtcttggaagcaataactgctaca
agctgcaaggaggcctttcattatgagtctcttgagactcttggagattcttttttaaaa
tatgctgtctctcaacaactttttagcagttatgaaaatatacatgaaggtctcctcagt
attaaaaggaaaaaaataatttctaatgctgccctgtgtaagttagggtgcaggtctgga
cttccgggcttcatacaaaatgaaccttttgatcctcatacctggaccgttccaggtgat
aagtctagaggttttaaattgaaagagttggttagtggggggaaaaaaatttatgttatg
ggagaaaggaaattaaatcgaaagatcattgctgatgttgtcgaggcactaattggtgcc
tttctcagcagtggtggtgaaaaggctgctctattgtttatggactgggttggtattaaa
gttagctttaataaaataccctatgaaagacactttgacattcaaccagagaaacaggtg
catgtcaatcatttagaatcacaattgaagtactcattcaatgaccgtactcttctagtg
gaagctttgacccatggttcctacatgcttcctgaaattcctagatgttatcagcgacta
gaatttcttggagattcagtgttggattatctcattacttggcatttgtataatagatat
cctggcatgtcacctggacagttaactgacatgaggtcagcttctgtaaataatgattgt
tatgcatggtctgctattaaccatgggttacacaagcatgtacttcatgcctcacaagaa
ttgcataagcatattgctgttacacttgtcaattttgataagttgtcgtcggcatcaact
tttggatacgggtcagagacatcactccctaaggtacttggagacattatagagtccctg
gctggagcaatactagttgattcagggtacaatatggaggttgtgtggcagagtataaag
ccacttttagaaccccttgtcacacctgaaacattgaggctccatcccgtccgagagttg
aatgaactatgccaaaagagaagttataatattatacaggaggatgtgtcccgtaaggat
ggtgtgaccagatttaaaatggaggtagaagccgatggggttattcaccagcatgaatat
attggttctgcactgaagggcacagccaagaagatagtctgcaaggaaatcttgaattcc
ttgaaggaggttaggggggcactgtag
DBGET
integrated database retrieval system
