Vigna angularis (adzuki bean): 108342886
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Entry
108342886 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108342886
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
var03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108342886
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108342886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108342886
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108342886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108342886
NCBI-ProteinID:
XP_017436267
UniProt:
A0A0L9VBJ9
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Position
6:complement(19789087..19796021)
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AA seq
708 aa
AA seq
DB search
MDEGEGGYGETADPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKN
DDSGFRNDDVEDKKPLPPLPVPDAAGVSIPGVGGGGEGVGAGGSGVAESRASGRVDGFQN
QGFRANDVGAKGGIRVELGHQSDKLSEIEEQGGNDGAAVQGIGQQPHAGVVASVGNEGMV
RQGQGGGSVGGGGGGGTANRVGGNGVGNSVGAVNSVNTGGVGGGGGGAGSGGTILFVGDL
HWWTTDAELETELSKYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATNCKEGMNGHVFN
GRPCVVAFASPFTVKKMGEAQINRNQQMNPSAVTQQGRRGPSDSGAKPGGGNISTGGNYQ
GGDGNRGYGRGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGIGGTPP
LLHPQSMMSQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVN
PAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDH
QYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDMGHDPEWSER
RHRDDRETGRERSRDRDRERSRDRDRERSRDRDRDRERDHRERDRHREDRDRYADHHRYR
DGEGEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcgaaggaggctacggtgagaccgccgatcccatggatcagttccaccgt
aacgaagctatatctgctgtcgctgacgatggtttcttggccgaggaagatgacgattat
gaagatctatataacgatgtcaacgtcggcgaagggttccttcaatctttgcgcaaaaac
gatgattccgggttccgaaatgatgatgtcgaggataagaagccactgcctccgctgcct
gttccggatgccgctggggtttcgattccaggtgtcggtggcggtggagagggagtcggc
gcaggtggaagcggagttgcggaatctagggcttctgggagagttgatggttttcagaat
caagggtttagagcgaacgatgtcggtgccaaaggtggaattagggttgaattagggcac
caatctgataaattgagtgaaattgaagagcagggtggtaatgatggtgctgcagtgcag
gggattggacaacaaccacatgctggagttgttgcgagtgtgggaaatgaaggtatggtg
agacaaggtcaaggtggtggtagtgttggtggtggtggaggaggagggactgctaatagg
gttggtgggaatggtgttgggaacagtgtgggtgctgttaatagtgttaatactggagga
gttggaggtggtggtggtggtgctggttctggtggtactatattgtttgtcggtgatttg
cattggtggaccactgatgccgaactggaaactgagcttagtaagtatgggcctgttaag
gaggtgaagtttttcgatgagaaggctagtggaaagtcaaaggggtattgtcaagttgaa
ttttttgacccttctgctgcaacaaattgcaaggagggaatgaatggtcatgtttttaac
gggagaccatgcgttgttgcgtttgcatctccttttacagttaagaaaatgggggaggca
cagataaacaggaatcagcagatgaacccatctgcagttacacaacagggaaggaggggg
ccttctgattcaggggctaagcctggtgggggtaatatttctacaggtggtaattaccaa
ggaggagacgggaatagaggttatgggagaggaggtaattggggaagagggaacaatcct
ggtatggggaatagggggcccgtgaatccgatgaggaataggggtggtgggatgggtggt
agaggtataatgggacatggtggaaatggatttggacagggtattggtggtacccctcca
ctgttgcatcctcagtcaatgatgagtcagggttttgatcctgcttttggtggtccaatg
ggtagaatgggtagctacggtggctttcctggtgctccgacgcctcctttttctgggatc
ttaccatcattccctggtgttggaggtgttggtttgcctggagtggcacctcatgttaat
cctgcattctttggaagagggatgccagttaatggtatggggatgatgcctacatcaggc
atggatggtcctaatatgggaatgtggtcagatccaaatatgggtggatggggtggggaa
gaacctggtggtgggaaggctggagagtcaagttatggggaggaagctgcatctgaccat
cagtatggtgaagtgagtcatgatagagctgggtggcctatgagggagaaagatagaggt
tcagaaagagactggtctggttcttctgagagaaggtatagggatgatagagatcaagga
tatgagagagatgcacctagagagaaagatatgggccatgatcctgagtggtctgaaaga
agacatcgcgatgatagagaaactggcagagaacggtcccgtgatcgtgacagggaaagg
tctcgtgaccgtgatcgtgaacgttctcgagatcgtgaccgcgaccgggaaagggatcac
cgtgagcgtgacagacacagagaagatagggacaggtatgcagatcatcataggtacaga
gatggggaaggagagcatgatgacgagtgggaaaggggacggtcatcaaggacacacagc
aaatcacggttatcacaagaggaggaacaccactctaggccgagagatgctgattatggg
aagaggagacggcttacttctgaataa
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