Vigna angularis (adzuki bean): 108342909
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Entry
108342909 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108342909
KO
K12816
pre-mRNA-processing factor 17
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108342909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108342909
Spliceosome [BR:
var03041
]
Complex C
Other components
Step II factors
108342909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
ECM10
Motif
Other DBs
NCBI-GeneID:
108342909
NCBI-ProteinID:
XP_017436301
UniProt:
A0A8T0KUL2
LinkDB
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Position
3:11180240..11186452
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AA seq
583 aa
AA seq
DB search
MDLLHQYSDDQNDDEPDSPSQNPSSPPRLLPGRTGAPKVDDTMLALTVSSSASALSRPID
PTQHLVGFNPSYDQLWAPIQGPAHPYAKDGIAQGMRNHKLGFVEDASIEPFLFDEQYNTF
HKFGYAADPSANNYVGDLDALRSNNAVSVYNIPRHQQKKRKTEAKDKKISDQNDEEDREE
EEGEEEIENPASEAWLLKNKKSPWAGKKEGLQGELTEEQKKYAEEYAKKKGEEKSGFGGE
KAEVVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRF
FPKYGHLILSASMDTKIKIWDVFNSGKCMRTYMGHSKAVRDICFSNDGTKFLSAGYDKNI
KYWDTETGQVISTFATGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQ
HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNANWL
AAQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
WKSCKVFRTLKCHEGVCIGSEWHPLEQSKVATCGWDGMIKYWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcttcaccaatactccgacgaccaaaacgacgacgaaccagactccccgtcc
caaaaccctagctctccgccgcgcctcctcccgggccgtaccggggcgcccaaggtggac
gacaccatgctggccctcaccgtctcctcatccgcctcggccctctccaggcccatcgac
ccgactcagcacctggtggggttcaacccctcctacgaccagctctgggcccccatccag
ggcccggcccacccttacgcgaaggacggcatcgctcagggcatgcgcaaccacaagctc
ggcttcgtggaggacgcctccatcgagccctttctcttcgacgagcagtacaacaccttc
cacaagttcggctacgccgccgacccctccgccaacaactacgtcggcgacctcgacgca
ctccgctccaacaacgccgtctccgtctacaacatcccccgccaccaacagaagaagcgg
aaaaccgaggcgaaggacaagaaaatatccgaccaaaacgatgaggaagaccgcgaggag
gaggaaggagaagaagagatcgaaaacccggcctccgaggcgtggctgctgaagaacaag
aagagcccctgggcggggaagaaggaagggttgcagggagagttgacggaggaacagaag
aagtacgcggaggagtatgcgaagaagaaaggagaagagaagagcgggtttggaggggaa
aaagctgaggttgttaaagataagagtacctttcatgggaaagaggagagggattaccag
ggtaggtcttggattgcgcctcctaaggatgctaaggctagtaatgatcattgctatatt
cctaagagattggttcatacttggagtggacacaccaaaggggtttctgctattcggttt
ttccctaagtatggccatttgattctctctgccagcatggataccaagattaagatttgg
gatgttttcaactctggcaagtgtatgaggacttacatgggacattcgaaagctgttagg
gatatttgtttcagcaatgatgggaccaagtttttgagtgctggctatgacaaaaatatc
aagtattgggatactgagacggggcaggtgatatccactttcgccactgggaaaattccc
tatgtcgtgaagcttaatccggatgaggacaagcagaatgttttgttggctggaatgagt
gataagaagattgttcagtgggatatgaataccgggcagataacccaggagtatgatcag
catctgggggctgtgaataccatcacctttgttgataacaacaggagatttgttacttct
agtgatgacaagtccctcagggtctgggaatttggtattcctgtggtgataaagtatatt
agtgagccccacatgcactccatgccttccatttcgcttcacccgaatgctaattggctt
gccgcacagagcttggataaccagatacttatttatagcacaagggagaagttccaactt
aacaagaagaagaggtttgcaggacatattgtggcgggatatgcctgtcaggtcaatttt
tctccggatgggcgatttgtcatgtcaggggatggtgaggggaagtgttggttctgggac
tggaagagctgcaaggtcttcagaactctcaagtgtcatgaaggggtttgcattggtagt
gagtggcatcccttggaacagagcaaggtagcaacgtgtggctgggatgggatgataaag
tactgggactag
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