Vigna angularis (adzuki bean): 108342924
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Entry
108342924 CDS
T04660
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108342924
03400 DNA repair and recombination proteins [BR:
var03400
]
108342924
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108342924
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
108342924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
108342924
NCBI-ProteinID:
XP_017436321
LinkDB
All DBs
Position
6:complement(30660709..30677313)
Genome browser
AA seq
1676 aa
AA seq
DB search
MAQKLHLLLEELGSKLESLPSSHDALIELLQQAASCLTDLDQSPSASTLESMKPFFNAIV
KPELLKHEDSDVKLLVAICVCEITRITAPEAPYSDDVLKDIFQLIVGTFSGLSDTSGPSF
DRRVAILETLAKYRSCVVMLDLECDDLVNEMFRTFFSVARDDHPESVLSSMQTIMAVLLE
ESEDVHPDLLSIVLSTLGRDRRDVSGAARKLSLSIVQQCMEKLEPSIKQFLLSLISGDSQ
EMNSQVQYDEVIYDLYCCAPQILYEVFPYVTRELMTDKLESRLKAVNLVGDIISLPGSSI
SEALQTTFSEFLKRLTDRDFGVRMSVLEHAKSCLLSNPLRAEAPQIISSLSDGLLDSDEK
FRKQVVDVICDVACHTLNAVSHETVKLVAERLCDKSLLVKKYTMGRLAEIYRAFCENSSN
TVNPSEYDWIPGKIIRCFYDKDFRSDIIESILCESLFPSDFSINDIVKHWVGIFSRFDKV
EAKALEKILEQKQRLQEEMRKYLALRQTNQGKDIPEVQKKIVFCFRVMSRSFADPTKAEE
SFQILDQLQDPNLWKILTDLVDPNTSFQQTREYRDEFLKILGENHQLYEFLNTLYIKCSY
LLFNKEHVKAVLSEIITNKSSENDHHIQYCMNILVIIARFCPYLFSGTEVELVNLLKDNS
DMIKEGVLNVLAKAGGTIREQLAVTSSSVDLILERLCLEGSQIQAKYAVHALAAITKDDG
LKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEAFIINKILKSDSK
EDHSRISWDDRSDLCVLKIYGIKTLVKSYLPAKDAHVRPGIDGLLGILRNILSYGEISKE
LQSSSVDKAHLRLASAKAVLRLSRLWDHKIPVDIFHLTLRITEIGFPQAKKVFLSKVHQY
IKDNLLDTKYACAFIFNIFGSKDSKPEEFAVDKQNLNDIIHMHHQTRAWQLSGQSDANSL
TAYPEYILTYLVHALANLSCPNIDDCKTVEAYHNLYRQLHLILSMLVQRDDDVKSEVAIN
NEKEIISTITSIFWSIKQSEDVVDASKSKNSHAICDLGLAITNRLVAKDVDLQALSHSVS
LPPMLYKACEKESGPMVSKEKSWLADESVLAHFESLELEMVSSQLAEDDTSKDREKDRKE
MSLGKIIKDIKSRGTKGKRVKKKKAVLAEKKKAVPAEKKKAVPAETKKAENDIDILNVVR
QINIDNLGLSTNFESTNGHENSLSKKLQKDPERATIKKRKGEDLTLVPVPKRKRSSFAHG
KSRSSSTPSKAPPRGSGEDSSRVKLLSGAEFTPDTDSKTIQRKKVKGTEPSVQAKAKVSK
SYHDDKSKEHDMKSPDNTKPTDKSKGDKFKSSTGSAKKLKRKSIGGLAKCITKEGESDAE
DLIGCRIKVWWPLDKKFYEGNVKSYDSSKRKHVILYDDGDVEVLCLEKERWELVDKGGKP
NKKLKLSKTVSSREVSTGKKQRSSSTSESKKTKQIVNGKSPSKQVKHGQKGASKIDFHRE
DAKESSDLTNPEDTVISKAEINSGGSEAEQVEGSGVIITKRKKISKKPKSVLRGKKPKKE
KTSSYKKESDQEKQEYVGRLSKEGVPQGDQNNGAESLKEIDVNESRGALRENDIGEESGS
EGNQNDSNGKSSPREVEKSPIKSASPDSAKIAEVSDDEPLSKWRRPSGKKSSGQKR
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagcttcaccttctgctcgaggagctgggatccaagctcgaatctcttccc
tcctcccacgacgctctcatcgagctcttgcagcaagctgcatcatgccttactgacttg
gatcaatcaccatcagcttcgacattggagtcaatgaagcccttttttaatgcaattgtt
aagccagaactgctaaagcacgaggatagtgacgtcaagcttctagttgcaatatgtgtt
tgtgagattactcgaatcaccgctcctgaagctccttacagtgatgatgttctaaaggac
atatttcagttgattgtgggcacttttagtggtctgagtgatacaagtggcccatccttt
gatcggagagttgctatactggagactcttgcaaaatatagatcctgtgttgtaatgctg
gatcttgaatgtgatgatctggtgaatgaaatgttccgtactttcttttcagttgccaga
gatgatcatccagagagtgttctgtcatccatgcaaaccataatggctgttcttttagaa
gaaagtgaggatgtacatccggatcttttgtctattgtactgtctacactaggccgtgac
agaagagatgtttctggggctgcaaggaagctttccttgagtattgtacaacaatgcatg
gagaaacttgaaccgagtatcaaacaatttttactatcattaatatcaggagacagccag
gaaatgaacagtcaagttcaatacgatgaagttatctacgatctctattgctgtgctcct
cagatcctatatgaagtttttccttatgttacaagagagctaatgactgacaagctcgaa
agtcgtttgaaagcagtgaacttggttggggatataatttctcttcctggatcctccatt
tctgaagcacttcagacaacattttcagagtttttaaagagattgaccgatagagatttt
ggggttcgcatgtctgtccttgagcatgcaaagagttgtctgctgtcaaatcctttaagg
gctgaagctcctcaaattatctcttccctttctgatggactgctggattctgatgagaaa
tttcgaaagcaagttgtggatgttatctgtgatgtagcatgtcataccctaaatgcagtc
tctcatgaaactgtgaaacttgtcgctgagcggctttgtgataaatctctacttgttaaa
aagtatactatggggagattggctgagatatatagagctttttgtgagaatagttccaac
acagttaatcccagtgaatatgactggattccagggaagatcattagatgtttctatgac
aaagatttcagatcggatataattgaatcaattctttgtgaatccttgtttccgtcagat
ttttcaatcaatgatatagttaaacattgggttgggattttctctagatttgataaagtg
gaagccaaggctcttgaaaagatacttgaacaaaaacaaagattacaggaagaaatgcga
aaatatttagctctgaggcagactaatcaggggaaagacattcctgaggtccaaaaaaag
attgtgttctgtttccgtgtaatgtctcgttcatttgctgacccaacaaaggcagaagag
agttttcagattcttgatcaattacaagatcctaatctctggaaaattttgacagatctt
gttgatccaaatactagcttccaacaaactcgtgaatacagggatgaattccttaaaata
ctcggtgaaaatcatcagctctatgaatttctgaataccctttatataaagtgttcctat
ttacttttcaacaaggagcatgtgaaagctgttctttcagaaatcatcacaaataaatcc
tcagagaatgatcatcatatacaatattgtatgaacatattagtgataattgctcgattc
tgtccatatctttttagtggcactgaggtggagctggtgaatttacttaaggataatagt
gatatgattaaagagggtgttctgaatgttttggcaaaggctggtggtactattcgtgaa
cagctcgcagttacatcaagttctgtagaccttattttggagagattatgtttagaagga
agtcaaatacaagccaagtatgctgttcacgctctggctgcaattacaaaggacgatggc
ctcaagtctctttctgttctgtacaagagacttgtagatatgctggaagagaaaacacat
ctacctgcagtattacagtctctggggtgtatagcacagactgcaatgcctgtatttgaa
actagagaaagtgaaattgaagcatttataatcaacaagattctgaaaagtgatagtaaa
gaagatcactcaagaatatcttgggacgataggagtgatctttgtgttttgaagatatat
ggcataaaaaccctagtgaaaagctacttgccagccaaagatgctcatgttcgtcctggt
atagatggtcttctgggtatcctgagaaacatactgtcttatggcgaaatatcaaaggaa
ctacagtcaagctcagttgataaggcccatttgcgacttgcttctgcaaaggcagttctt
cgtttatcaaggctctgggatcacaagatacctgttgatattttccacttaactctaaga
ataacagagattggtttccctcaagctaagaaggttttcttaagcaaagttcatcaatat
ataaaggacaaccttttagataccaaatatgcatgtgcctttatattcaacatatttgga
tccaaggattccaagccagaggagtttgcagtggacaagcagaacctgaatgacattatt
cacatgcatcaccaaaccagggcttggcagctttctggacaatcggatgcaaattccttg
accgcttaccctgaatacatccttacatacctagttcatgcccttgctaacctatcctgc
cccaatattgatgactgtaagactgttgaagcataccataatctatacagacagctacac
ttgatactatcaatgctagtgcaaagagatgatgacgtcaagtcagaagtagctattaac
aatgagaaggaaattatatctaccattacttctatcttttggagtattaagcaatccgaa
gatgtggttgatgcatcaaaatcaaagaactcacatgccatatgtgaccttgggttagca
attactaatcgtctagtagcaaaggatgttgatttacaagcgttgtctcattcagtttct
ctacctccaatgctatacaaagcatgtgagaaggaaagtggccccatggtgagcaaagag
aaatcctggttggctgatgaaagtgtcttggctcactttgaatcacttgaattagaaatg
gtttcatctcaattagctgaggatgacacttcaaaggaccgtgaaaaagatagaaaagaa
atgtcccttggaaaaataataaaggacataaaatctcggggaaccaagggcaaaagagtt
aaaaagaaaaaggctgtgctagctgaaaagaaaaaggctgtgccagctgaaaagaaaaag
gctgtgccagctgaaacaaaaaaggctgaaaacgatatcgatatcctaaatgtggtcaga
caaattaacatagataacttgggattatccactaattttgaatctactaacggtcatgaa
aattcattgagtaagaagttgcagaaggatccagagcgggcaacaattaaaaagcgaaaa
ggagaagacttaaccctggttccagtgcctaaacgtaaacggtcttcctttgcccatgga
aaatcaaggtcgagtagtaccccatcaaaggctcctccgagaggttcaggggaagactct
tctagagtgaagttgctatcgggtgcagaatttacccccgatacagatagcaaaacaatt
cagagaaaaaaggttaaaggcactgagccctcagtacaagcaaaagccaaggtttccaag
agctatcatgatgacaaatctaaagagcatgacatgaagagtcctgataatacaaagcca
actgacaagtctaaaggtgacaaattcaagtcatccacaggatctgctaaaaaactgaaa
agaaaaagtattggaggattggctaagtgtataacaaaggaaggtgaaagtgatgctgaa
gatctaattggctgcagaattaaagtttggtggcctttggataagaaattttatgaaggc
aatgttaagtcttacgattcttcaaagaggaaacatgtgatattatatgatgatggggat
gtagaagtgctctgtttggaaaaggagcgatgggagcttgttgacaagggtggcaaacct
aataagaagctaaaactctcaaaaactgtgtcttcccgtgaagtgtctactgggaagaag
cagagaagttctagtacttcagaaagtaaaaagacaaaacaaatagttaatggtaaatct
cctagcaagcaagtaaaacatggacaaaaaggtgcctcaaaaatcgatttccatcgtgag
gatgccaaagagagttctgacttaacaaaccctgaagatactgttatatctaaagctgag
attaactcaggtggttctgaagcggaacaggtcgaaggatctggtgtaataataactaaa
aggaagaaaattagcaagaaaccaaaatcagttttacgtggaaagaaacccaagaaagag
aagacctcaagttataagaaagaatcagatcaagagaagcaggaatatgttgggaggctt
tctaaagagggtgtcccacaaggagatcaaaataatggtgcagaaagtttgaaagagata
gatgtcaatgagtcaagaggagctttgagagaaaatgatattggagaagaatccggttct
gaagggaaccaaaatgacagcaatgggaaaagtagtcccagagaagtggaaaaatcacct
ataaagtcagcgagtcctgatagtgccaaaatcgctgaagtttctgatgacgagccgctg
agcaaatggaggcgtccttcgggaaagaaaagctcagggcaaaaacggtga
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