KEGG   Vigna angularis (adzuki bean): 108343002
Entry
108343002         CDS       T04660                                 
Name
(RefSeq) uncharacterized protein LOC108343002
  KO
K15361  WD repeat-containing protein 48
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108343002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:var03400]
    108343002
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     108343002
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EML_2 NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WD40_RFWD3 RAWUL Beta-prop_WDR75_2nd Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IP5PC_F WDR54
Other DBs
NCBI-GeneID: 108343002
NCBI-ProteinID: XP_052735115
LinkDB
Position
6:complement(26331176..26342519)
AA seq 764 aa
MHRVGSASNGNNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTSEASDGSDYLFTGSR
DGRLKRWVLSVDRATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWNALSLGTCTR
TLRQHSDYVTCLAAAGKNSNIVASGGLGGEVFVWDIEAATTPVSKSNDSTVDESSNGING
SGNSLPLTSLRTINSSTNMSMNTNQTQGYIPIAAKGHKDSVYALATNESGTILVSGGTEK
VVRVWDARTGSKTLKLKGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDIGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPILQLALHGDNMWVAS
TDSSVHRWPTEGCNPEKIFQRGNSFLAGNLSFSRARVSLEGSTPVPVYKEPTLTILGTPA
IVQHGVLNNKRHVLTKDASGSVKLWEITKGVVIEDYGKVSFEEKKEELFEMVSIPAWFTV
DTRLGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKVNLGRETLKGLLAHWLRKRKQRTG
SPASANGELLSGKDIASRSLTHSRIEVDGSSENDTMVYPPFEFSVTSPPSIITEGSHGGP
WRKKITDLDGTKDEKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQIVTQGKLSA
PRILRIHKVINYVIEKMVLDKPLDSLNADGSFAPGVTGSQSQHQTVGDGSFRSGFKPWQK
LRPSIEILCSNQVLSPEMSLATVRAYIWKKTEDLVLNYRLVQSR
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgcgagcaacggaaacaactcaactcgtcctcgcaaggagaag
agattaacctatgtgttgaatgattctgatgacactaagcattgtgcaggcataaattgt
ttggctctgcttacatctgaagcatctgacgggtctgattatctcttcactgggagccgt
gatggcaggttaaagcgatgggtactatctgtggatagagcaacatgctcggctactttt
gaatctcatgttgattgggttaatgacgctgttcttgttggtgacagtacacttgtttct
tgttcgtcagatactaccctcaagacatggaatgccttgtcccttggaacttgtactagg
acgcttcggcaacactctgactatgttacatgccttgcagcagcaggaaaaaatagcaat
attgttgcctctggtggccttggtggggaggtttttgtatgggatatagaggctgccacc
actccagtctctaagagcaatgacagtacagttgacgaatcttcaaatggtatcaatggt
tctggcaactcactaccattgacaagcttgcgaactattaactcaagcaccaatatgtcc
atgaacactaatcaaactcagggatacattccaattgctgccaaaggccataaagattct
gtttatgcattagctacaaatgaaagtggaacaattctcgtgtctggtggcactgaaaag
gttgtgcgcgtctgggacgcaagaacaggatcaaagactctaaagctaaaagggcacaca
gataacatcagggctctgcttctggattctactggcagatattgtttatctggatcttca
gactcaatgataaggctttgggatataggtcagcagagatgtgtgcattcttatgcagtt
catacagattctgtttgggcacttgccagcaccccaacgtttagtcatgtttatagtggg
gggagagacttttcattatacttgacagatttgcaaaccagagagagtagtttgctttgt
actggcgagcaccctattcttcaattagctttgcacggtgataacatgtgggttgcatca
acagactcttcagttcatagatggcccactgaaggatgcaaccctgaaaagattttccag
agaggcaattcttttttagcaggaaacttgtctttttcaagagcaagagtgtcactggaa
ggatctacccctgttcctgtatacaaagaacctaccttaactatccttggtacacctgca
atagtacaacatggagttttgaataataagaggcatgtgctgacaaaggatgcatctggt
tcagtgaaactttgggagattactaaaggcgttgtgattgaagattatggaaaggtttca
tttgaggagaaaaaggaagagttatttgagatggttagcattcctgcatggtttactgtg
gataccaggcttgggagcttgtcagttcatttggacacaccccagtgtttttctgcagaa
atgtattcagcagatcttaacattgtcggcaagcctgaagatgataaggttaatttgggc
cgtgaaacccttaaagggctcctggctcattggttgagaaaacgaaagcagagaacagga
tccccagcttcggctaatggggagttattatctggaaaagatattgcttctagaagtctt
acccattcaagaattgaggttgatggtagttctgagaatgatactatggtttatcctccg
tttgaattctcagttacttcccctccttccattattactgagggctctcatggaggtccg
tggaggaaaaaaattactgatttagatggaactaaggatgagaaagacttcccctggtgg
tgccttgattgtgtcttgaataatcggttacctcccagagaaaacactaaatgcagtttc
tatttgcagccgtgtgaaggctcctcagtccagattgtcacccaagggaagctaagtgct
ccacgtatattaagaattcacaaggttattaattatgtaattgagaagatggtgcttgac
aaacctttggacagcttaaatgctgatggtagtttcgcccctggggttactggttcacag
tcacagcatcaaacagttggagatggatcctttcgatctggatttaagccttggcaaaag
cttagaccttctattgaaatattgtgcagcaaccaggtcctatctcctgaaatgagcttg
gccacagtgcgagcttatatatggaagaaaacagaggacttggttctaaattacagacta
gttcaaagcaggtga

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