Vigna angularis (adzuki bean): 108343069
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Entry
108343069 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108343069
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108343069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108343069
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108343069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
DUF4897
Motif
Other DBs
NCBI-GeneID:
108343069
NCBI-ProteinID:
XP_017436603
UniProt:
A0A0L9VC95
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Position
6:complement(23812821..23815245)
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AA seq
381 aa
AA seq
DB search
MRKRRVASVTAAAEEETLQNHGNNPNEKENSEGNGFFACYLLTSLSPRYKGHTYIGFTVN
PRRRIRQHNGEIRCGAYRTKKRRPWEMVLCIYGFPTNVSALQFEWAWQHPVESLAVRKAA
VEFKSLSGIASKIKLAYTMLTLPSWQSMNITVNFFSTKYMKHCGGCPSLPAHMKTKTGSL
DELPCYSIYGLSENEDDNVDDVEFDDDNNNTSASGSVPDVSDDLDSPDSPKNQIHGEKIS
EAFEWIKESEVPEASSNSLSSQEQRLPISSTTPLTMKSSSSTTTTTTLLQRVEIIEEADF
MNVVNKSDSGLIEPAQSDAALAANTNRTVVRTFVVPHEAEIVDLSTPSPSCRSVLDRKKR
RVSSSVTDFIDLTNSPNFVQL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagagaagggttgcatctgtgacagcagcagcagaagaagaaactttgcaaaac
catggcaataacccaaacgaaaaagagaatagtgaaggaaatgggttctttgcttgctac
cttttaacctctctcagccctcgctacaaaggccacacatacatcggatttacggtgaat
ccaaggcgccggatcaggcaacataatggggaaattcggtgtggagcttatagaacgaag
aagaggaggccatgggagatggttttatgtatatatggcttcccaacaaatgtctctgct
cttcagtttgaatgggcttggcagcaccctgttgaatcgttggctgtaaggaaagcagca
gtggaatttaaatccctctcaggaattgccagcaagattaaacttgcatacacaatgctc
acccttccatcatggcaaagcatgaatatcactgtgaacttcttctccactaagtacatg
aaacactgtggtggttgtccgagcttgccagcgcacatgaagaccaaaactggctcactg
gatgaacttccatgctatagtatctatggtttgtcagagaatgaagatgataatgttgat
gatgtagaatttgatgatgataataataatactagtgctagtggttctgttccagatgtg
agtgatgacttagactctcctgattcaccaaaaaatcaaatccacggggagaagattagt
gaagcatttgagtggattaaagaatctgaagtcccagaagcatcaagtaattcattgtct
tcacaagagcagcgcctaccgattagttctacaacaccactgacgatgaaatcatcatca
tcaacaacaacaactactactttattacaaagagtagagatcattgaagaagctgatttt
atgaatgtggtcaataaaagcgattctggtttgattgaaccagcacaatcggatgctgca
ttggcagccaatacaaatcgaactgttgtcaggacatttgttgtgcctcatgaagctgag
attgttgatttgtccaccccttctcctagttgcagaagtgttctggacaggaaaaagaga
agagtttcttcatctgttactgattttattgacttaacaaactcccctaactttgttcag
ttgtaa
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