Vigna angularis (adzuki bean): 108343209
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Entry
108343209 CDS
T04660
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108343209
09122 Translation
03015 mRNA surveillance pathway
108343209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108343209
Spliceosome [BR:
var03041
]
Complex A
Other components
Complex A specific factors
108343209
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108343209
NCBI-ProteinID:
XP_017436818
UniProt:
A0A0L9VC53
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Position
6:23299166..23303290
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AA seq
565 aa
AA seq
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MPCERGLRPSVLGPFDFTVLSLHHFTNSLPKISLIFRLSRSQRTLDRIMSGAYGQDGGGS
APPSYGASGGYGSGGGSYGGGTYGGGGASGGYGGTDGGGGYGAKSSGNDGGYGGNDGGGY
GGRSGYGGNDGGGYGGRGGGQGGRGGGGFGGGYGGRGGGGGGGGGYQGGDRGGRGGGRGG
GGRGGSGRDGDWRCPNQSCGNLNFARRVECNKCGAPCPNPNSSNERGGSGGGGGGFSRGG
GGGGGYGNTRGGRSGNYDGGRGNDYNSGGGRSGNYDGGRGNDYNSGRGGSNDGRGGSYRG
NQGREDGSYGQVPAPNAQSYGGAGGSFPPSYNSYGGNASYGTDAVPPPSSYTGGPNSYPP
SYGGNVGGYGGDNQGNGRSGGRSGPPSGYDNSHGAGNRGGFGGSSAEPPAAVKQCDDNCD
DSCDNSRIYISNLPPDVSIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGNNK
GDACLAYEDPSAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAAPAYNQGGNRGGYGGDRR
RDNYRDGGGSGPDRRDHYGNRSRPY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtgaaagaggtttaaggccttcagtgcttggcccatttgatttcacagtgctt
tctttacatcacttcacaaactcgttgccaaaaatctcactgatttttcgtctttcgcgg
tcccaacgaaccctagatcggatcatgtctggagcatacggtcaagacggcggcggctct
gcgccaccgtcatatggagccagcggcggatacggttccggtggtggtagttatggaggg
ggaacctatggagggggcggtgccagtggaggatatggtggtacggatggcggtggaggt
tacggagcgaaaagcagcggaaacgacggcggatacggtggtaacgatggcgggggttat
ggaggaaggagcggctacggtggaaacgatggcggaggctatggaggaagaggcggtggt
caaggtggccggggaggtggagggttcggtggtggatatggcggtcgaggtggaggtggc
ggtggcggtggtggatatcaaggcggtgatcgcgggggtcgtggcggcggtcgcggcgga
ggcggccgtggcggtagcggcagagatggagactggcgttgccctaaccaaagttgtggg
aatttgaactttgcgagaagggttgaatgtaacaaatgcggtgctccttgtcctaatccg
aatagttccaatgaacgaggtggaagtggtggcggtgggggtggctttagtagaggcgga
ggtggcggtgggggatatggtaacactcgagggggaagatcggggaattatgatggaggg
agaggtaatgactataacagtggagggggtcgatctggtaactatgatggtggaaggggt
aatgactataatagtggaaggggtggtagtaatgatggtagaggtggttcatatagaggt
aatcaaggtagagaagatggtagctacggtcaagttcccgctcctaatgcccaatcttat
ggtggtgctggtggaagcttcccaccctcttacaattcttatggtgggaatgcaagttat
ggaactgatgcagttcctccaccttcgagttatactggcggacctaattcctatcctcca
tcatatgggggtaatgtcggtggttatgggggagataatcaagggaatgggcggagtggt
ggtagatctgggcctccgtctgggtatgacaatagtcatggtgctggtaatcgaggtgga
tttggtgggtcttctgccgagcccccagctgcagtgaagcagtgtgatgataattgtgat
gacagctgcgacaactctagaatatacatctcaaaccttccaccagatgtgtcaattgaa
gaattgagggaactttttggaggcattggacaagttggaaggataaagcagaagaggggc
tacaaggatcagtggccttggaacattaagatttacacagatgagaatggaaataacaag
ggagatgcttgtcttgcttatgaagacccttctgcagcacattcagctggcggtttttac
aataattatgatttgaggggttacaaaatcagtgttgcaatggcagaaaaatctgctcca
agagctgcacctgcttataaccaagggggcaataggggtggctatggtggagatagacgc
cgagacaactatagagatggaggtggctctgggcctgataggcgtgatcattatggaaat
cgttctcgtccgtactag
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