Vigna angularis (adzuki bean): 108343332
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Entry
108343332 CDS
T04660
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108343332
03460 Fanconi anemia pathway
108343332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108343332
03036 Chromosome and associated proteins [BR:
var03036
]
108343332
03400 DNA repair and recombination proteins [BR:
var03400
]
108343332
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108343332
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108343332
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108343332
FA (Fanconi anemia) pathway
Downstream FA components
108343332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
108343332
NCBI-ProteinID:
XP_017437037
LinkDB
All DBs
Position
6:complement(1734405..1745754)
Genome browser
AA seq
1049 aa
AA seq
DB search
MCSWQILSHSPNNFHWQITEHVSHASPTPLPSPIPLPSMADLLLQGSPALLPSHDAGARG
EERAIDETLSFSNSLFTTGSGKKVTISSRGLVRAKTLLDTIDINIQSTSKLFAFGETAGK
QQLQVYEESPESKLHTVINSPSVGVLHALDNGFEERNSFKQAPIKFRTAGGRSISISSGA
LRRARSLLGDSDVGDLFEGGNAGDSVFSFPLKRQTDAAAPSDYSTPVVHGMASDSNFKTK
SFTFPMKSSRQRGLPTKFPCEGDGINLTKKFDAVGEESDCGRKSTDACGQKSLYGRSQTP
NSLVYDSSLNCFSSKVDTLGGATRRALADLSNTINTDTANNRQAASGKRRLGLSVTVSPF
KKPRSSNSPAPLEEDVGKSPHDLSQLSSDISECKGEVSTRYPFHYPRVYIKDYFVGRPME
KRACFPNLSRQVTSVNAEKYVFHKGSGDNGIGAEAFVHLLALHGASMHFATKEWVTNHYK
WIVWKLACYERYYPASSAGNFLTVSNVLEELKYRYEREVNHGHRSTIKKILEGDALSSSM
MILCISSIHSSYIEESGTCFDTKSGAQKTKAVKIELTDGWYSMNAILDVPLSKQQAAGRL
FVGQKLRLSGAGLCGWNGPVSPLEVSSTVSLLLHINGTYRAHWAERLGFCKVAGPPLAFK
CIKGNGGLIPQTLAGITRIYPILYKERLSSGRSVVMSEKMENKMTELYNQRRSAVVDGII
SEYQKESSYINYDSDSEGAKIYNMLETAEEPEFLMADMSAEQLSSFAAYKAKLNAIRQSE
KEKSIEKALKDAGLGHREVTPFMKLRVVGLTYKTRQDKPKEGIVTIWNPTEKQRLELVEG
GAYSIAGLMPSSSVFDILHLHARGSSTKWWPLSSNAREQFRPFFRGRKSTPLSSLGDIPV
SNEFDIAAYIVHVGGVYTSNQHQKQWVFVTDGSIMNGLQSEKLINSLLAICFCSPLIDHD
SSFPLISCNLAGSTVGFCNLIKKEKDHTNNIWVADANENSAYYLNFDSSNCSHLRNAASS
IRRWADNSSLIIEKLKEKVLYVVGDDCKA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatggcaaatcctctcccactctccaaacaatttccactggcaaatcaccgaa
cacgtttcccatgcttctcccactcccctcccctctcccattcccctcccttccatggcc
gatcttcttctccaaggctcaccggcccttcttccttcccacgacgccggtgcgcgaggt
gaagagcgtgcaatagatgaaactctcagcttctcgaattcgctttttacgacaggctct
gggaaaaaagtgaccatatcttctagaggtctggttagagcaaagacattgctggatacc
attgatattaatatccaaagtacaagtaaattgtttgcatttggcgaaacagccggaaag
caacaactacaagtatatgaagaatcacctgaatcgaagctgcatacagttatcaacagt
ccttctgttggggttcttcatgcattagataatggttttgaggaaaggaattcattcaag
caagctccgattaaatttcgcactgcaggtggaagatctatatccatttcgagtggcgcg
ctgcggcgagctcggagccttctcggtgattcggatgtgggggatttgtttgaaggaggg
aatgccggtgattcagtgttctcatttcctttgaagcgacaaactgacgcagctgctcct
agtgattatagtactcctgtggttcacgggatggcatcagatagcaattttaagacgaag
agttttactttccccatgaagtcttctaggcaaagaggattgccaaccaagtttccttgt
gaaggtgatgggattaacttgaccaagaagtttgatgctgttggggaagagagtgattgc
ggcaggaaaagtacagatgcttgtggacagaagtctttgtatggcaggagccaaacacca
aattcactagtatatgattcttcattgaattgtttttcttcaaaagtagatacactgggt
ggggcaacacgcagggcattggctgatctttcaaataccattaacacggatacagcaaac
aataggcaagctgctagtggaaaacggagactagggttgtctgtaactgtttctcccttt
aaaaagccacgcagttccaactctcctgctcctttagaggaggatgttggaaaatctcct
catgatttgtctcaattgtcctctgatatctcggaatgcaaaggagaggtttctacccga
tatccatttcactatccaagggtgtacatcaaggattattttgttgggcgtccaatggaa
aagagagcgtgttttcccaacctgagtagacaggtgacatcagttaatgcggaaaagtac
gtgtttcataaaggatctggtgataatggtataggagcagaggcttttgttcatctattg
gctctccatggagcttccatgcattttgcaactaaagagtgggtcacaaatcattacaag
tggattgtctggaaattggcatgctatgagagatactacccagctagttcagctggaaat
tttttgactgtatcgaatgtgcttgaggaactgaagtacagatatgaaagagaagtgaat
catggccaccggtctaccatcaagaaaattctcgaaggggatgcattgtcttcatcaatg
atgattctatgcatttcaagtattcactctagttatatagaagaaagtgggacttgtttt
gacacaaaatctggggctcagaaaacaaaagcagtgaaaattgaactaactgatggatgg
tattcaatgaatgctattttagatgttccattgtcaaagcaacaagctgctggaagattg
ttcgtgggacagaagctccgactctcaggagcaggattatgcggctggaatgggccagtt
tcaccccttgaggtgtcatcaacagttagtttattgctgcacataaatggaacgtataga
gctcactgggcagaacggttaggattctgtaaggttgccggtcctcctttggcttttaaa
tgcataaaaggaaatggtggtctaataccgcaaacgttggctggaattactcgcatatat
cccattctttacaaggaaaggttaagcagtggacggtctgttgtcatgtcagagaagatg
gagaataaaatgacagagttgtacaatcagagacgctctgctgttgtagatggcatcatt
tctgagtatcagaaggaaagttcgtacattaattatgacagtgatagcgaaggtgctaag
atttataacatgctcgagacagcggaagaacctgaattcctaatggcagatatgagtgca
gagcagcttagttcttttgctgcgtataaggccaaactaaatgcaatcagacagtcagaa
aaggaaaaatcaatagaaaaagctttgaaagatgctggcttgggacatagagaagtcacg
ccatttatgaagttacgagtagttggattaacttataaaactcgacaagacaaacctaaa
gaaggcatagtaacaatctggaatcccactgagaagcagcgtctggagttggtggaagga
ggagcatattccattgcaggactcatgccatcaagttctgtttttgatatccttcacttg
catgctagagggtctagtaccaaatggtggcctttatcttctaatgcaagagaacagttt
aggccattttttcgtggtagaaaatcgaccccgttatcaagtttgggtgacatccctgtt
tccaacgagtttgacattgctgcatatattgtgcatgtgggaggagtttatacatcaaat
cagcatcagaagcaatgggtttttgtgacggatggatccatcatgaatggtttacagtca
gaaaagttaatcaactccttgcttgctatctgcttttgctctccgttgattgatcatgat
tcatcatttccattaatcagctgcaaccttgcaggatctacggttggtttttgtaatctt
ataaaaaaggaaaaggaccatacaaacaacatctgggttgccgatgctaacgaaaactct
gcttattatttgaattttgattcctcaaactgttctcacctcagaaatgctgccagctcc
atcagaagatgggcagacaattctagtttgataatagagaaactgaaggaaaaggtgttg
tatgtggttggtgatgattgtaaagcatag
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