Vigna angularis (adzuki bean): 108343385
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Entry
108343385 CDS
T04660
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108343385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108343385
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108343385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108343385
NCBI-ProteinID:
XP_017437125
LinkDB
All DBs
Position
6:31158860..31165365
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AA seq
539 aa
AA seq
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MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRSKCVDCGVTLTRLIREYN
VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLHGRQITDTLREKYKNKPWLL
EDETGQSQYHGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGRSRKKTGEDDEGHVSDKGE
EDEDEESDRKSRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREELAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDE
DDDDDDMDDEVGNPPVIATKQKDAPKEEPVDISPSKPAATGPARGTPSSKSSKGKRKSNE
EVKPANTATPKKVKQENEPKSSTKDVNGSASKSNAPPKGTPPSSSKPGSSGTATGPVSEE
EIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVILRDK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggacctgcaattgaaatcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgagttgcggcaaaaccatggctgag
aatcgctccaaatgcgtcgattgtggtgtcacccttactcgcctgattcgagaatacaat
gttcgtgcaagttctaccaatgacaagaactactttattggaaggttcatgaccggttta
ccagatttttcgaagaagaaaagtgctgagaacaagtgggctctgcagaaggaaggactg
cacggtcgccaaattactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggacgaaacaggtcagtcccagtaccatggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaagaaaggaaggaatttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcagagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacatggaaaatttgaggacaaggaaagcaacacaggtgga
gggagaagccgtaaaaaaactggtgaggatgatgaaggtcatgtttctgataagggagag
gaggatgaagacgaggaatccgacaggaagagtagacttggacttaataaaagagctggt
gatgatgatgaagaaggtccaaggggaggggaccatgatctagatgatgacgacgttgag
aagggtgatgactgggagcatgaagaaattttcactgatgacgatgaagctgttggaaat
gaccctgaggaaagggaggagttagctcctgaagttcctgctcctcctgaaataaaacag
gatgaggaggaggaggatgaagataatgaagaagggggaggtctgagtaaatctgggaaa
gagctgaagaagctgcttgggaaagctagtggtctgaatgaatctgatgcagaggatgaa
gatgatgacgatgacgacatggatgacgaggttggcaatcctcctgtgattgctacgaag
cagaaggatgcccctaaggaagaacctgttgacattagcccttcaaagccagcagcaaca
ggacctgctcgtggaacaccatcttctaagtcttcaaagggaaagagaaaatcaaatgaa
gaagtaaaaccagcaaatactgcaacaccaaagaaggtgaaacaggaaaatgaaccaaaa
tcgtctaccaaagatgtaaatgggtctgcatctaaaagcaatgcacctcccaaaggtaca
cctccgtcatcatcaaagcctgggtcttccggaacagctactggacctgtgagtgaggaa
gaaattagggctgttttaaggcaaaagactccagtgaccactcaggatcttgtagctaaa
tttaaggcaagattgagatcttcagaggataagcaagcatttgctgagatcctgaagaga
atctctaaaatacagaagactgcaaatggatccagttatgttatcctgagagataagtga
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