Vigna angularis (adzuki bean): 108343909
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Entry
108343909 CDS
T04660
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108343909
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108343909
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Transket_pyr
Motif
Other DBs
NCBI-GeneID:
108343909
NCBI-ProteinID:
XP_017437839
UniProt:
A0A0L9VJI4
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Position
8:complement(28742706..28756785)
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AA seq
574 aa
AA seq
DB search
MGVKNLWDVLESCKKRVPLHHLQNKRVCVDLSCWMVQLHSVSKSHACVKEKVYLKGLFHR
LRALIALNCSLVFVTDGSIPAIKLSTYRRRLNVGKEVALNETKLQKVTSLQRNMGSEFSC
MIREAKMLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSLDSDIFLFGARTVYRDICL
GDGGYVVCYEMTDIERKLGLGRDSLIALSLLLGSDYYQGVHGLGPESACQIVKSIGDKNV
LQKIASEGLGWVKKRRGGKNDFGLDDNILEVINAYMKPKCHSADSDIVLKAFAQYTFQRT
KLQQLCAEFFLWPSEKTDGYILPSIAERDLRRFANLRLTSSKVGLDLPLHEIPVKCPVSE
IIKSRRVHGRECYEVSLEGMDGLETSIVPADLIESACREKILEFEERKAQRKKQNNQKRR
PKKKETNSSLAELDLKLQNLLLDNSLRDQDNFNACDSSERVSRIATPMADEADLNTEDLL
HLSHDIEHTGLIQNTSNLYITNKEVSTTGKNEIIDLLSPSPPKKINFFSKSLQPSDQNIE
VINLSDSENDMSVEHKQKAKELRLFLASIRNEIH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaagaacttgtgggacgtgttggaatcgtgcaagaaaagggttccccttcac
catctacagaacaagagggtgtgcgtggacctctcgtgctggatggtgcagcttcacagc
gtgagcaagtcccacgcttgcgtaaaggagaaagtgtatcttaaagggctctttcaccga
ctcagagcactcattgcgctcaattgcagcctcgtcttcgtcacagatggatcaattcct
gccataaaattatcaacctataggcgtcgtttaaatgttggaaaggaggtagcactaaac
gaaacaaagctacagaaagtgacttcgttacagagaaatatggggtctgagttttcttgc
atgattagagaggctaaaatgttggggatggctcttggaatttcttgtttgaatgggatt
gaagaagctgaagctcaatgtgctttgttgaattttgaatcattatgtgatggatgtttt
agtctagattcagacatattcctttttggtgcaaggacagtgtatagggatatctgcctt
ggagacggtgggtatgttgtttgttatgagatgacagatatcgaaagaaaacttggactt
ggaagggactcattgattgctctctccttgcttcttggcagtgattactatcaaggagtt
catggtctgggtccagagtcggcttgtcagatagtcaaatcaattggggacaaaaatgtt
cttcaaaaaattgcttctgaaggacttggatgggtgaagaaaagaagaggaggcaagaac
gattttgggctggatgataacattttagaagtaattaatgcttatatgaagccaaaatgt
cactcagctgattcagatattgtgctcaaggcttttgctcaatatacgtttcaacgtact
aaactccagcagctatgtgctgaattctttctgtggccttcggagaaaacagatgggtat
atacttccaagtatagctgaaagagatttacgacgatttgccaatttgcgtttaacttca
tctaaagttggactggaccttcctttacatgagatccctgtaaagtgtcctgtctcagaa
atcatcaagagcagaagagtgcatgggagagaatgctatgaggtttctttggaaggaatg
gatggactagaaacttcaatagtccctgcagatcttatagaaagtgcctgccgtgagaag
attttggagtttgaggaaagaaaagctcaacggaagaaacaaaataatcagaaaagaaga
ccaaagaaaaaggaaactaattcatctcttgctgagcttgatctaaagcttcagaatttg
ttgcttgataatagtttgagagatcaagacaacttcaatgcctgtgattcttcagaaagg
gtatcaaggattgcaactcctatggctgatgaagctgatcttaatacagaagacttgttg
catctatcacatgacatagaacacactgggttgattcagaatactagcaacttatatatt
accaataaggaagtttccactacaggtaaaaatgagatcatagatcttctgagcccttcc
ccacctaaaaaaatcaattttttctcaaaatctctgcaaccaagtgaccaaaatatcgaa
gtgattaatttgagtgattcagaaaatgacatgtctgtagaacacaagcagaaagccaag
gaactgagattgttcttagctagtattaggaatgaaattcattga
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