Vigna angularis (adzuki bean): 108344199
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Entry
108344199 CDS
T04660
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108344199
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108344199
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Glyco_hydro_28
RXLR
Motif
Other DBs
NCBI-GeneID:
108344199
NCBI-ProteinID:
XP_052723833
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Position
8:complement(24575567..24578268)
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AA seq
469 aa
AA seq
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MGYAGKMIKNIGNDLIYYKVTDSSDDPINPKPNTLRYGTSVIQGNVWITFQKDMQIKLEK
PLLISSFTTIDGRGVNVHIAHNACLMIFKATNIIIHDIRVHHCKPQAHGIVMGPEGKVIP
IGHVDGDAIRLVTASKIWIDHNTLNDCQDGLLDVTRGSTEVTISNNWFKNQDKVMLLGHD
DGYLRDKNMKVIVVYNHFGPNCNQRMPRIRHGYAHVANNFYQGWLQYAIGGSMEPSLKSE
ANLFMAPIIGNKEVTWRKSSDKSGGTWNFHSIRDIFENGASFNITKGGGVKKPNYTKEQN
FKVLDAKFVRLLTRSSVLSLLLPPCSPILPLRSLPFFPSVTTVASAAVASSADASSTATS
ATTASAAPDRHLQAALDRQATPNRRALRRCCLRRCWLRRSRSTGPYRHRQATPDRQALRH
CCLRRCWLRRSRSTGPDRHRQAAPDRRALRRCCLRHSSPILALLLRPAQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgctggcaagatgataaagaacattgggaatgacctcatttattataaagtt
actgactctagtgatgatcctataaatcccaagcccaacaccttgaggtatggaacttct
gttattcaaggtaatgtgtggatcacattccaaaaggacatgcaaattaaactagagaaa
cctcttctcattagtagttttaccaccattgatggtcgaggtgttaatgtccacatcgct
cataatgcatgcttaatgatctttaaggccaccaacataattatccacgacattcgagtt
caccattgcaaacctcaagcccatgggatcgtgatggggcctgaaggaaaggttattcct
ataggtcatgtagatggagatgcaataagattggttactgcttcaaagatttggattgac
cataatacacttaatgattgtcaagatggtttgcttgacgtaacacgaggttctactgaa
gtgactatctccaataattggttcaaaaaccaagataaggttatgcttcttggacatgat
gatggatatctgagagacaagaatatgaaggttatagtggtgtacaatcattttggtcct
aattgcaatcaacgtatgccaaggattcgtcatggatatgcacatgtagccaataatttt
tatcaaggatggcttcaatatgctattggtggaagcatggaacctagtcttaaaagtgaa
gctaacctctttatggcaccaatcataggaaataaagaggtgacatggagaaagagtagt
gataaaagtggaggtacatggaactttcattcgataagggatatttttgaaaatggagct
tccttcaatataacaaaaggaggcggtgtgaaaaaaccaaactatactaaagaacaaaat
tttaaagttcttgatgccaaattcgtgagattgttgacgcgttcatctgtgctctcactt
cttctccctccgtgctctcccattcttcccctccgttctctcccattcttcccctctgtc
acaactgtagcctccgccgctgtagcctcctccgctgatgcctcctccactgctacctcc
gccactactgcatccgctgctccagatcgccatctccaagccgctctagatcgccaagcc
actccaaatcggcgagccctccgtcgttgttgcctccgccgctgctggctccgtcgctct
cgatccaccggtccatatcgccatcgccaagccactccagatcggcaagccctccgtcat
tgctgcctccgccgctgctggctccgtcgctctcgatccaccggtccagatcgccatcgc
caagccgctccagatcggcgagccctccgtcgttgctgcctccgccattcttcccctatt
ttggcattgttattgaggccagcccaatga
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