Vigna angularis (adzuki bean): 108344363
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Entry
108344363 CDS
T04660
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03410
Base excision repair
var03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108344363
03450 Non-homologous end-joining
108344363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108344363
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108344363
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108344363
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108344363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
NTP_transf_2
BRCT_2
HHH_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
108344363
NCBI-ProteinID:
XP_052722695
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All DBs
Position
8:complement(13535734..13573223)
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AA seq
562 aa
AA seq
DB search
MLRHFSLVPRGYLWMNALKHTPLASPWFLVEGINKESKRRKMAPKKKPESDPSGMFSGMV
VFLVTKGVQVRRLQIWKERLVQMGAVIEERLCKRVTHVFAMNSDALLQQLDRELLTRFKG
RVLIYQWLEDCLKSGEIVSEDMYVLNLNSQGKPEKSWDPQPCQSDPQHLHNNKKTKYTEI
INNESNDQGGKNVSLLSTSSHEEGDSLSYGNTGPQHLDSESDDSSSSYCPPDQNKNITEI
FGKLVTIYRALGDDRRSFSYYKAIAVIEKLPFKIESADQINNLPSIGKSLKDHIQEIITS
GKLSKLEHFEADEKVRTISLFGEVWGIGPSTALKLYEKGHRSLDDLRNDGSLTNAQKLGL
KYFDDIRQRIPRHEVQEMEHILQKAGEDVLPGVVIICGGSYRRGKATCGDIDIIITHPDG
QSHKGFLPKFVKHLKDMNFLREDLIFSIHSEEGSDSGVDTYFGFCTYPRQELRRRIDLKV
YPRHIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLFPATHGSGSKRGAKGSASLKF
NTEKEVFHFLDFPWLEPHERNL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacacttcagcctggttccaagaggttacctttggatgaacgcactgaagcat
acgccactcgcatcaccgtggtttctggtagaaggcatcaacaaggaaagtaaacgtcgc
aaaatggcgccaaagaagaagccagagtccgatcccagtggaatgttctcaggcatggtg
gtgtttttggttaccaaaggagtccaagtccgtcgactccagatttggaaggagaggttg
gtgcaaatgggggctgtgatagaggagcgcctctgcaaacgggtcactcatgtttttgct
atgaactcagatgcgcttcttcaacaactggatagggaacttttgacacgttttaaaggg
agagttctcatttatcaatggctggaggactgcttgaaatcaggggagatagtatctgaa
gatatgtatgtgctgaacttgaattctcaaggcaaacctgaaaagtcttgggaccctcaa
ccatgtcagagcgatcctcaacatttgcataataataaaaagaccaaatacacggaaatt
ataaataatgaaagtaacgatcagggaggaaaaaatgtttcacttttatcaacaagcagc
catgaggaaggggatagtttaagttatggaaatacaggacctcaacaccttgattctgaa
agtgacgattcatcttcatcgtactgtccacctgatcaaaacaaaaacataacagagata
tttgggaaacttgtaaccatatatagagcattgggagatgatcgaaggtcctttagctat
tacaaggctattgctgttattgagaagttgccatttaaaattgaaagtgctgaccagata
aacaacctgccatctattggaaaatcattgaaagatcatattcaggagatcataactagt
gggaagttatccaaattagaacactttgaagcagatgagaaggtacggacaatatcatta
tttggtgaagtatggggcataggaccatccacagcattgaaattgtatgagaagggacat
cgttcattagatgatcttaggaatgatggctcacttacaaatgcacaaaagttagggctg
aaatactttgatgatatcagacaacggattccacgccatgaggttcaggagatggaacac
attttacaaaaagctggggaggacgttttacctggggttgttatcatctgtgggggatca
tatagacgtgggaaagctacctgtggagacattgatatcataataacacatcccgatgga
caaagtcacaaaggatttttgccaaagtttgtaaaacatttaaaggatatgaatttccta
agagaggatttaattttcagtattcacagtgaagagggttctgattctggtgtagacact
tactttggattttgtacctatcctaggcaggagttgcgtcgtcgtattgatttgaaggtg
tacccaagacacatatatgcatttggactaatagcatggacaggaaacgatgtgctcaat
aggaggttgaggttgctagcagaatctaaaggattccggcttgacgatactgggttgttt
ccagccacacatggttctggcagcaaacggggtgcaaaaggtagtgcaagtttgaaattt
aatactgaaaaagaggtatttcatttcctggactttccgtggcttgaaccacatgaaaga
aatctctaa
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