Vigna angularis (adzuki bean): 108344502
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Entry
108344502 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108344502
03041 Spliceosome [BR:
var03041
]
108344502
03036 Chromosome and associated proteins [BR:
var03036
]
108344502
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108344502
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108344502
mRNA cycle factors
Common to processing body (P body) and stress granule
108344502
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108344502
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108344502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
108344502
NCBI-ProteinID:
XP_017438425
UniProt:
A0A0L9TKA6
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Position
1:complement(54358300..54368942)
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AA seq
616 aa
AA seq
DB search
MRTSWADLAANSAAENSGPAFSANNVGTGSTVAPSRPVYVPPHLRNRQPSAEAPVPAPAP
AYSGPSSGSVGSSSAGNSGSRWPAPRNDHRSGYGGGGGRPGGWGNRSGGWDRGREVNPFE
EEDNAEDAFDEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRCKYV
KPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPL
ALVLSPTRELSMQIHEEARKFSFQTGVKVVVAYGGAPINQQLRDLERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKE
IQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQA
LTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALADLMQE
ANQEVPAWLSRYAARSYGGGRNRRSGGRFGSRDFRREGSFTRGSSDYYSAGNSSGGYGGS
GGYAGGYGPGVTSAWD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgatttggctgcaaattctgcagctgaaaattcgggtcccgct
ttttctgctaacaatgtgggaactggtagcactgtagctccttcacgaccagtttatgtt
cctcctcatcttaggaaccgccagccatcagcggaagccccagtcccagccccagcccca
gcatacagtggtccttcttctggttctgttggctctagttctgctggtaattctggatcc
cgttggcctgcacccagaaacgatcatcgttctgggtatggtggtggtggtggacgccca
ggtggatggggaaatagaagtggtgggtgggatcgtggcagggaagtcaacccctttgaa
gaagaggataatgctgaagacgcatttgatgagcaggagaatacaggaataaattttgat
gcatatgaggacattccggtggagaccagtggtgaaaatgtgcccccacctgtgaataca
tttgcagagattgacttgggtgatgcacttaatcagaatataagaaggtgcaaatatgtg
aagccaacacctgttcagcggcatgccataccaatatccctaggtggacgggatttgatg
gcttgtgcacagactggttctggaaagacagctgcattctgtttcccgatcatcagtgga
attatgaggggccaacctgtccagaggccacctcgtggggtgcgtactgtgtatccactt
gcgcttgttctctctccaacgagggagctatcaatgcaaatacatgaagaggctaggaag
ttttcattccaaactggtgttaaggtggttgttgcttatggtggagcaccaataaatcag
cagctgcgggatcttgagagaggggtggacattcttgttgcaactcctggaagactggta
gatttgctggagagagctagagtttcactgcagatgattcgatatctggccttagatgag
gcagatcggatgctagatatgggttttgagccacaaataaggaagattgtagaacaaatg
gacatgcctccaccaggtgctagacagactatgttgtttagtgcaacatttccgaaagag
atacagagactggcttctgattttctttcaaattatattttcctggctgttggaagagtg
ggttcaagtactgatttaattgtccaaagagttgagtacgttcaagagtctgacaagaga
agtcacctaatggaccttcttcatgcacagagggcaaatggtgtacagggaaagcaagct
ttgactttagtttttgtggagacaaagaagggagctgattcactggaacactggttgtgt
cttaatggttttcctgcaactactattcatggtgacagatcgcagcaggaaagagaatta
gcattgaggtcttttaaaagtggcaacacccccatattggttgctaccgatgttgctgca
cgtggtcttgatatcccccatgttgctcatgtagtcaactttgacctgccaaatgatatt
gatgattatgtacaccggattggaagaacagggcgagctggaaagaaaggccttgcaact
gcattctttaatgataacaattcatcactagctagagctttagcagatctgatgcaagaa
gcaaatcaagaagtacctgcttggctctctcggtatgctgctcggtcttatggtggaggc
agaaaccgccgatctggtggtcggtttggtagtcgagactttcggagagagggctcgttt
acaaggggttcttcagattactacagtgcaggaaacagcagtggtggatatggaggttct
gggggatatgctggagggtatggtcccggcgtcactagtgcctgggactga
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