Vigna angularis (adzuki bean): 108344527
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Entry
108344527 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108344527
03015 mRNA surveillance pathway
108344527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108344527
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108344527
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108344527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108344527
NCBI-ProteinID:
XP_052722858
LinkDB
All DBs
Position
8:complement(6094020..6099999)
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AA seq
494 aa
AA seq
DB search
MAEPSTAAATTTAVDPPPPVTKRWADEADEETEASSTATATEASSVNLDSLKIEDNDENP
PKLLDDPDDSSIQKVTSGETPYTSAAKFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPM
ILDPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCVCPTRELANQNIEVLRKM
GKYTGIASECAVPTDSNALSIAKRAPIMAQVVIGTPGTIKKWMSFKKLGAARLKILVFDE
ADQMLAEDGFKDDSLRIMKEIEKVNSNCQVLLFSATFNDTVKNFVSRTVKEDHNKLFVKK
EELSLDAVKQYKVYCSDELAKIEVIKDYIFEIGENVGQTIIFVRTRNSAQMLHKSLVDMG
YEVTSIQGALGHDEREKIVKEFRDGLTQVLISTDLLARGFDQQQVNLVINYDLPMKHTAS
YTREPEPDCEVYLHRVGRAGRFGRKGAVFNLICDEKDERLMSKIENHFGTRVAEVRAESV
EDYRGALKEAGLLQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccatccaccgccgccgccaccaccaccgcggtggaccctccgccgccagtt
accaaaagatgggctgacgaagcggacgaagaaaccgaagcctcctccaccgccaccgcc
actgaagcatcttccgtcaaccttgattcattaaaaatcgaagacaacgatgagaaccct
cccaaactcttggatgaccccgacgattctagcatccaaaaggttacctctggagaaacg
ccgtacacgtcggctgcgaagttcgaggacttaaacctctcgccggagcttctgaaaggg
ctctacgtggagatgaagttccagaagccgagcaagatccaggcgataagtttgccgatg
atcctcgacccgccgcaccgcgacctcatcgcgcaggcgcacaacgggtctgggaagacc
acgtgcttcgtgcttgggatgctcagccgcgtcgatcccaaggtgcaggcaccgcaggct
ctctgtgtctgccctactcgggagttggctaatcagaacatcgaggttctccgcaagatg
gggaagtacaccgggattgcgtcggaatgcgctgtgccgacggatagcaatgcgctctcg
atcgcgaaaagggcgccgattatggcgcaggtggtgatcggaacccctggcaccatcaag
aagtggatgagcttcaagaaacttggggccgccaggttgaagattcttgtttttgacgag
gcagatcaaatgcttgcggaggatggatttaaagatgattccctgaggataatgaaagaa
atagaaaaagtcaattctaattgtcaggttcttctgttttctgctacatttaatgacacc
gtcaagaatttcgtttcaaggacagtcaaagaggatcataataaactttttgtaaagaaa
gaagaactatctttagatgcagtgaagcaatataaagtctactgttctgatgaacttgcg
aagattgaagtgataaaagattacatatttgaaataggagagaatgtggggcaaaccatc
atatttgtgcgtacaagaaatagtgcacaaatgttgcataaatcacttgttgacatgggc
tacgaggttacatctatacaaggtgctcttggtcatgacgagagagagaaaattgttaag
gagttcagagatggtttgactcaagttcttatttcaactgatcttcttgctcgtggcttt
gatcagcaacaggttaatttggtcatcaattatgatcttccaatgaaacacactgccagc
tatacccgtgaacctgagcctgattgtgaagtgtatttgcatagggttggcagagctggg
cgctttgggcgcaaaggggctgtatttaacctgatatgtgatgaaaaggatgaaaggctc
atgtcgaagattgagaatcacttcggcactcgtgtagctgaggtgcgagcagaaagtgtt
gaagactatagaggtgctctcaaggaagctggtttactgcaatga
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