Vigna angularis (adzuki bean): 108344542
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Entry
108344542 CDS
T04660
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108344542
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108344542
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108344542
NCBI-ProteinID:
XP_052723373
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All DBs
Position
8:5638910..5645956
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AA seq
405 aa
AA seq
DB search
MASSHRNNETVSASKVVHFRNLPEQCSHEDLIELCNPFGKVVNLLCNVGPNKNQGFAEFA
NINEAISMVSNYVLSPDRVQLHGKNIYVQYSDRPEIIVTRFAKGNILLVTMEDVKAGDVS
IDNMRLVFSEYGFVQKISTFEKNAGFQALIQFSDIESASSAKEALDGKKIPRSLLPDRIS
DGNFRIAYSGHRDLNIKFQSNRSRDYTNATLPVNQATIARALQPIPRTADNHVLLVSFEN
MVHDVTLDVLHGVFSEIGTVHKIYIFKKNGRTHALIQYHDVATAKAAKNILEGHCIYGGG
SCKIHLAYSRHTDINVKPFGDKSRDYSKAEQTNPHAMNPNAYPYCYMCAPATFPDEAYGY
GVGQSNPMVYTTGYLQITPHGVPAFSPQMQAFLGFLPIQPYYYGY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcccatagaaataacgaaacagtgtctgcttcgaaggtggtacactttcga
aaccttcctgaacagtgctctcatgaagatctcatagagttgtgtaatccttttggtaaa
gttgttaatcttttgtgcaatgttggccccaataagaaccagggtttcgctgagtttgca
aatataaatgaagccatttcaatggtttcaaattatgttttgtctccagatcgtgttcaa
cttcatggcaaaaatatttatgtccagtattctgatagaccagaaattattgttaccaga
ttcgcaaaaggaaatatccttctggtaaccatggaagatgtgaaagctggagatgtaagc
attgataacatgcgtttggtcttttctgaatatggtttcgtacaaaaaatctcaacattt
gaaaagaacgcaggtttccaggctttgattcagttttctgatattgaatctgcttcttct
gctaaggaagcactggacggaaaaaaaatacctaggtccttgctgccagaccgtattagt
gatggtaactttcgcattgcatactcaggccatcgagatcttaatattaagttccaatct
aatcgtagcagggactacacaaatgctactcttcctgttaaccaggctactattgcaagg
gcattgcagccaatacctcgaactgctgacaaccatgttcttttagtttcattcgagaat
atggtccatgatgtcactttagatgttcttcatggggtgttctctgaaattggaactgtg
cacaaaatttatatatttaaaaagaacggtcgaactcacgcactgattcagtaccatgat
gtggcaacagcaaaagctgcaaaaaatattcttgagggtcactgtatatatggtggtggc
tcttgcaagattcatttggcatactctcgtcacactgatatcaatgtaaagccttttggt
gacaaaagtagagactattcaaaggctgaacagacgaatcctcatgcaatgaaccctaat
gcttatccctactgttacatgtgtgcacctgctacttttcctgatgaagcttatggctat
ggtgtcggacaaagcaatcctatggtttacactacaggttacttacaaatcactccacat
ggagttcctgctttctcacctcaaatgcaagcttttttagggtttttgcctatacaacct
tattattatggttactag
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