Vigna angularis (adzuki bean): 108344552
Help
Entry
108344552 CDS
T04660
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108344552
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108344552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108344552
NCBI-ProteinID:
XP_017438473
UniProt:
A0A0L9VPL8
LinkDB
All DBs
Position
8:4508804..4510429
Genome browser
AA seq
439 aa
AA seq
DB search
MRGSSAKVVFTLLVTLAIIIPCLEAGIAKYDDFLKAQAEEAHEIALESYVPTPELVTGEL
NYHVHRALKNRTRRGLNEAKNPIGGRCDSSNPIDNCWRCNKDWANDRYRLARCGKGFGRR
AVGGLGGPIYVVTDNSDEDMVNPKPGTLRYAVTQKGPLWIIFQRSMIITLKQELLISSDK
TIDGRGANVQIKDGGGLTIQFANNVIIHGIRVKNIVPKEGGMIRDSYDHVGLRTRSDGDA
ISLFGASNVWIDHVSLSNSADGLIDVIQGSTAITISNCHMTRHNDVMLFGATDSYTEDKI
MQITVAFNHFGQGLIQRMPRCRWGFFHVLNNDYTHWMMYAIGGSAGPTILSQGNRFIAPN
NDAAKEITHRDYATPDVWKNWQWQSDMDLLMNGATFNTSGAPIKITHKKGLIMKPRDGSH
VSRLTRHAGALNCFVGLPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagtagtgcaaaggttgtcttcaccctgttggtcactctggccatcatcatc
ccatgccttgaggctggcattgctaaatacgacgactttctgaaagctcaagctgaagaa
gcccacgaaatcgctctcgagtcctatgtgccaactcctgaattggtcaccggtgagctc
aattaccacgttcatcgtgccttgaaaaacagaacaaggaggggactgaatgaggccaag
aaccctattggagggcgctgtgacagcagcaaccccattgacaattgctggaggtgcaac
aaagactgggccaacgacaggtatcggttggccagatgcggaaaagggttcggaagacgc
gcagtgggtgggctcggtggacccatttacgttgtcaccgataactccgacgaggacatg
gtcaaccctaagccaggaaccctccgatatgccgtcacccaaaagggtccactttggatc
atcttccaacgcagcatgatcatcactctgaagcaggagcttctcatttcctccgacaag
accatcgacggtcgtggtgccaacgttcagatcaaggacggtggtggcctcaccatacag
ttcgcgaacaacgtcatcatccacggaattcgcgttaagaacattgtgcctaaggagggt
ggcatgatcagggactcctacgaccacgttggactgagaacgaggagtgatggtgatgcc
atctccctattcggagcctccaacgtgtggatcgatcatgtatctctctctaactctgcc
gatggactgatcgatgtgatccaaggctccacagccatcaccatctccaactgccacatg
acgagacacaacgatgtgatgttgttcggtgcgactgactcgtacacggaggacaagatc
atgcagataacagtggcattcaaccatttcgggcagggactgatccagaggatgccaagg
tgcagatggggattcttccacgttcttaacaacgattacactcactggatgatgtacgcc
attggtggaagcgcagggcctactattcttagccaaggaaaccgtttcattgctcccaac
aacgacgctgcaaaggagatcacacacagagattatgctacaccggacgtctggaagaac
tggcagtggcaatccgacatggaccttctcatgaacggtgccactttcaacacttccggt
gctcccatcaagattacacacaagaagggtctcatcatgaagccaagagatggcagtcat
gtcagcagactcacacgccatgctggcgctctcaactgctttgttggtttgccttgctag
DBGET
integrated database retrieval system