Vigna angularis (adzuki bean): 108345526
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Entry
108345526 CDS
T04660
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108345526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345526
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108345526
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108345526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
108345526
NCBI-ProteinID:
XP_017439593
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All DBs
Position
8:15578169..15620683
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AA seq
895 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGISSKKGKNKPPRLIHLETSITRHKA
HVKKCEFILRLLDNDELSPEQVNDVKDFLDDYVDRNQEDFEEFSDVDELYSSLPLDKVES
LEDIVTIPPGLAKVAPVLSLKPLPTSASASQTSEQADDTASQDSNSDVGARTPPPKSSTV
SSTATTPVATPAANFATPVSINVTVPNLSSPPPISSVTPGSNSLRSSLEISTAVNASFVN
QSSTVKEDEINSFPVRRPSPSLSDVALIRNISRNSLSNQTTNNIPVVSGNMVSSNGPLGS
VSSTSEITKRNILVADDRLGSNGMVPTLVSPLSNRMIIPQVARGTDGTSSVDSSNANEGA
TLSGRVFSPSAIPGMQWRPGSPFQNQNDMGHVRARTEIVPDQRERYLQKFQQVQQGQSAL
LYMPSYAGGNHKQFSAQQQNPLLQQFNSQGSSVASQSGMGLGVQSSGLSGISSTSVPQPP
ISVHSPSSQQSLLSVVSKDPDVGNSKVDESQQHIFPDDSGTESTASTGISKNFMNEDELK
STYAIDSPAGVPGSLPEPVQTSRGIDLSPGQPLQSNQRTGNLGVIGRNSTDLGLVGDNFS
AFTANSGGVRDQLYNLQMLEAAHLKLPQPKDSERPRTYTPFPFFPVMQKHPTITPPSFPQ
VQAPIVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWF
QRHEEPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTDFTFEYNYLEDEPIV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagtcggaaactccagggcgagattgaccgtgttctgaagaaggttcaggaa
ggcgtcgaagtctttgatagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaggagaagttcgaggctgacctgaagaaggagattaagaagctgcagaggtacagggac
cagattaagacttggattcaatccagtgaaatcaaagataagaaggttagtgcctcgtat
gagcaggctttggtggatgcacgcaagcttattgagcgtgaaatggaaagattcaagatc
tgtgagaaggagacaaagacaaaagcattctctaaagaaggcttaggtcaacagcccaaa
actgatcctagagagaaggctaaatcggagacaagggattggttgaacaatgtggttggg
gaattagaatctcagatcgataactttgaagctgagcttgaaggaatttcttcaaagaaa
ggaaagaacaagccacccagattgatacatctagaaacatcaatcactcggcacaaggct
catgtaaagaaatgtgaatttatcttgaggctacttgataatgatgaactaagtccagag
caggtgaatgatgtcaaagatttcttggatgactatgtagatcgtaatcaggaggacttt
gaagaatttagtgatgttgatgagctatatagttcattacccctagataaggtggagtca
cttgaagatattgtaacaattccccctggtcttgctaaggtggcacctgttcttagcttg
aagcctttgccaacatcagcttcagcatcacaaacatctgagcaagctgatgatacagct
tctcaggatagcaattctgatgttggtgcaagaactccacctcctaaaagtagtacagtt
agttctactgcgacaacaccagtggcaacaccagcggcaaattttgctactcctgtttct
ataaatgttacggtgcctaacttgtcaagtccaccgcccatttcatctgtcacacctggt
tcaaattctcttcggagttccttggaaattagtactgctgtcaatgcttcatttgtaaat
cagtctagcactgtgaaagaagatgagattaatagtttccctgtccgaagaccatctcca
tcactttctgatgttgcactcataaggaatatcagcagaaacagcctgtcaaatcaaaca
acaaataacatacctgttgtatctgggaacatggtttccagcaatgggccccttggttca
gtttcttcaacttctgaaataaccaagagaaacatattggttgctgatgatagactcgga
agcaatgggatggtaccaactcttgtatcccctttaagtaatagaatgattattcctcag
gttgcaaggggtactgatggaacttcctcagttgactctagtaatgccaatgaaggtgca
actttgtctgggagagttttctccccttctgctattcctggcatgcaatggagacctgga
agccccttccagaatcaaaatgacatgggtcatgttcgtgcaagaactgaaatagttcct
gatcagagggaaagatatttacagaagttccagcaagtgcaacaagggcaaagtgctctt
ctttatatgccatcctatgctggaggaaatcacaagcagttttctgctcaacaacaaaat
cctctcttacagcagttcaattctcaaggctcatctgttgcttctcaatctggtatggga
cttggagtccagtcttcgggtcttagtggtatttcttccacctcagtaccacagccaccc
atttcggtccattccccatctagccaacaatcactgctgtcagttgtttctaaagatcca
gatgttggcaattctaaggttgacgagtcacagcaacatatttttcctgatgattcgggg
actgaatctactgccagtactggaattagcaagaattttatgaacgaagatgaactgaaa
tccacatatgctatagactctccggcaggagtacctggctctcttccagagcctgttcag
acttctaggggtattgatttgtctcccggccaacctttacaatcaaatcagcgtactggt
aaccttggtgttataggaagaaattctactgaccttggacttgttggtgacaactttagt
gcattcactgctaattctggtggagttcgtgatcagttatataatttacagatgcttgag
gcagctcacctcaaacttccgcaacctaaggactcagaacgtcccaggacctacactcct
tttccattttttccggttatgcagaaacatcctacgataactcctcctagttttcctcaa
gttcaggcaccaattgttaataatccagccttttgggagagagtgggtctagaaccatac
ggtactgataccctgttctttgcattttactatcaacagaatacttaccaacaatatatg
gctgcaaaagagctaaagaaacagtcttggagatatcaccgtaagtataacacatggttt
caacggcacgaagagccaaaagttgcaacagatgaatatgagcaaggaacatatgtgtac
tttgatttccatatagcaaatgatgacatgcaacatgggtggtgtcaaagaatcaagact
gacttcactttcgaatataattacctcgaagatgagcctatcgtctag
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