Vigna angularis (adzuki bean): 108345530
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Entry
108345530 CDS
T04660
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108345530
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108345530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
Motif
Other DBs
NCBI-GeneID:
108345530
NCBI-ProteinID:
XP_017439600
LinkDB
All DBs
Position
8:complement(6334691..6359998)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSFPVTSGAGAAAAFSGSRGIGLSNTVHSELAAYLPLPSLPVFCGASDQDLRLVDSPARL
NRVDVLAQSGKIAELLRHTDVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYSTA
GPVKEQISGSAVTERRKSESSFSVPSQTQKDYNATHSRQLDNFSTNDISTLSSKKSKVKK
KGGDGISIAPDSAELQGAHIQRFCELLEDLCSKSELNSDDRDEAEWLSLPLSDLRLLVNE
ITSIREKKLLHLVPIEVLVRLLKVLDHQIHRAEGLSIEECDNSSDSELVSSVFIALESIH
AALAVMAHSDMPKQLYKEEIIERILEFSRRQIMDVMCACDPSYRALHRPGENTGFEVDDY
EENEAEFGSASKKRRTNKTLKLKKSASSRVSTAVNTILQKLCTVLGLLKDLLLIERLSDS
CILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYVQHRIYVIDEMVQLLWKLPYSKRA
LRSYHVREEEPRQIQMVTALLIQLIHCSANLPDALRKASNGNSVLEASVDASTPIKSHEA
VTEACCLFWSRVLQRFASVKTQDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVL
LLQNAGPKSKDVSARTMAIDILGTIAARLKRDALVCSQEKLWILQDFLSPDVHAEHQAKD
ICCVCLGGRVENLFTCHGCQRLFHADCLGIKEHEISSRNWSCQACICHKQLLVLQSCCNS
QQKNNVKKNSKASNDSEVSTQDIVQQLLLNYLQDVTSPDDLHLFICWFYLCLWYKDDSNF
QQKSIYYFARMKSKIIVRDSGAVSSMLTRDSIKKITLALGQNSSFCRGFDKILHTLLASL
RENSPVIRAKALKAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIAS
HPDVGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSDANFSGFTRACTEIITRVSDDEA
SIQDLVCKTFSEFWFEEPHASQTHSFGDGSTVPLEIVKKTEQIVQMLRGMPNNQLLVTVI
KRNLALDFLPQSAKATGISPVSLATVRKRCELMCKCLLEKMLQVEEMNSDEVEVRALPYV
LLLHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLLESILFIIDAVLPMLGK
LPPIIVGELEQDLKQMIVRHSFLTVVHACIKCLCSASKMSGKGAVVVEQLVQFFFKCLDT
PAVDNKQKVGRSLFCLGLLIRYGNRLLANSSNKLIDFGSSVRLFIKHLSAEDFVVKVRSL
QALGFVLIARPEYMLESYVGKILEEILSSAADTRLKIQGLQNMYEYLLDAESRMGTDKDD
DNVAGYTVGAGQSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNEQVRQSALKIVEIVL
RQGLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQ
SICGGSENVDTKIQSKMPISGKGKPEAGPLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVR
KFDNPRWNKLVIAFLTYCTEVLALLPFISPDEPLYLIYAINRIVQVRAGPLEANFKAWSS
SISNHGTPYGNGMHQQAPEESTVTTQAMSVDLNGSIQQNIYAHLNSNDLRSLDLNGSNHQ
QVDYSYTGSPETKPHATGYTDFNFSKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDD
ARCQAYSPTELPKPGEVISRQNIAFSLGESQFSLPTTPQELVPRYQEFKHALREDTVDYS
HYTANIKRKRPTTTPRKVQARKAVHVSSGNYNEEYDDDYSGGSAMRNISFSGSRRSSLRS
SRQY
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccagtcacttccggcgccggcgccgccgcggccttctccggctctcgaggc
atcggcctttccaacaccgtccactccgagctcgccgcctacctcccgctgccgtcgctc
ccggttttctgcggtgcctccgaccaggacctccgcctcgttgactcgccggcgcggctc
aaccgcgtagacgtgctcgcgcagtccggcaagatcgccgagctgcttcgccacaccgat
gtgtcgtacttgaatttaagagatgaagccaaaggtgttccttatatatatgttgagcct
ttagaactccatgatgaagttctcaggtgcaatcctgaagcatttgaatacagcactgca
ggtcctgttaaggagcagatctctggcagtgcagtaactgaaaggaggaaatctgaatca
agtttttctgtcccaagtcagactcagaaagactataatgcaacacatagtcgccagctt
gataatttttccacaaatgatatttccacgttgtcttctaaaaaatcgaaagtaaaaaag
aaaggcggtgatggaatatctatagcacctgattctgctgagcttcaaggtgcccacatt
caaaggttttgtgaacttttggaggatttatgcagcaaatctgaactaaatagtgatgac
agagatgaagcagaatggttgtcactgcctctttctgatcttagattacttgtcaatgaa
ataacatctattcgtgaaaagaaacttctgcatttggttcccatagaagtccttgttaga
ctattaaaagttctagatcaccagatacatagagcagagggcctgtcaattgaggaatgt
gataatagttcagattcagaattagtttcatctgtttttattgcattggagtccattcat
gctgcattagcagtgatggctcattctgatatgccaaagcaactttataaagaagagata
attgagagaattctggagttttctaggcgtcagataatggatgttatgtgtgcatgtgac
ccatcgtatcgtgccttgcatagacctggtgaaaacactggatttgaagtagatgactat
gaagaaaatgaagctgaatttggttcagccagcaagaaacgacgcactaacaagactttg
aagttgaagaaatcggcatcaagcagggtctctactgctgtgaatactatccttcagaaa
ttatgcactgttcttgggctactcaaagatttattgttaatagagaggttatcagatagt
tgcattctacaacttgtaaaaacaagtatcacaacatttttggttgataatatccagctt
ttgcaactgaaggcaatcagtttactcagtgcgatattctatttatatgtacagcatcgc
atttatgtgatagatgaaatggttcagcttctatggaaattaccgtattcaaaacgagct
ttgaggtcttatcatgtacgtgaggaagagccaaggcagatccaaatggttactgcttta
ctgattcagttgattcattgtagtgctaacctgccggatgctttaagaaaagcatcaaat
ggtaattctgtattagaagcctctgttgatgctagtactccaattaaatcccacgaggca
gttacagaagcctgctgtctgttttggagtcgtgtacttcaacgctttgcaagtgtaaag
actcaggatgcttctgagttgaaatccataatagagaatcttgttacagatttactgacg
actctaaatttacctgaatatcctgcttcagctcctattcttgaggttctctgtgttcta
ctacttcagaatgctgggccaaaatctaaggatgtctctgcacgtaccatggcaattgat
attcttggtacaattgctgcaaggttgaagcgtgatgctttggtttgtagccaggagaag
ttatggatacttcaggatttccttagtcctgatgttcatgctgagcatcaagcaaaagat
atatgttgtgtctgtttagggggaagggttgaaaacctgtttacatgtcatggttgccag
aggctttttcatgctgattgcctgggcattaaagaacatgaaatttccagccgaaactgg
tcctgccaggcatgcatctgtcataagcaactacttgtattacaatcatgttgcaattca
cagcagaagaataatgtgaaaaagaattcaaaagcgtcaaatgattctgaagtttctacg
caggacattgttcaacagttacttttgaattacctacaagatgtcacctctcctgatgat
ctgcatcttttcatttgctggttttatctctgcctgtggtacaaagatgattcaaatttt
cagcagaagtccatttattactttgcaagaatgaaatcaaaaatcatagtacgggattct
ggcgctgtatcttctatgctgacaagggattcaatcaagaagattactttagctttgggc
caaaacagttcattttgccgagggtttgataaaattcttcacacgcttctggcaagcttg
agggagaactctccagttattagggctaaggctttaaaagcagttagcatcattgtagag
gctgatccagaggtattgggagataagcgtgtgcagtctgctgttgagggaaggttctgt
gattctgcaatatctgttagagaagcagcattggaacttgttggtaggcatattgcttca
catcctgatgtgggttttaagtattttgagaagattgctgagagaataaaagatactggt
gtaagtgttcgaaaacgagctataaaaatcattagagatatgtgcacgtcagatgctaac
ttctctggatttacaagagcttgcacagagataattacacgtgttagtgatgatgaagct
agcatccaggaccttgtttgtaaaactttcagtgaattctggtttgaggagcctcatgct
tcacaaactcacagctttggggatggtagtactgttccactcgagatagttaagaaaaca
gagcaaattgttcaaatgttaagaggaatgcccaataatcaacttcttgtaactgtaata
aagcgcaatttggcacttgattttttgcctcagtctgcaaaagccacagggatcagtccg
gtgtctcttgctacagtacgtaagcggtgtgagttaatgtgcaaatgcttgctggagaag
atgttgcaggttgaggaaatgaacagtgatgaagttgaagtgcgtgcacttccgtatgtg
ttgctcctgcatgcattttgtcttgtggaccctactctctgtgcaccagcttcaaaccct
tcccaatttgttgttacattgcagccatatctgaagactcaggttgacaatcgtatggtt
gcgcagctgcttgagagtatactattcataattgatgctgtgctgcccatgcttgggaag
ttgcctccaattattgttggggaacttgagcaagatttaaaacaaatgattgtccggcat
tctttcttgacggtcgtccatgcctgtatcaagtgcctctgctctgcgagtaaaatgtct
ggaaagggggctgttgtagttgaacaacttgttcagttcttcttcaaatgtttggatact
ccggctgttgataacaagcagaaagttggacgatctctcttttgtcttgggttacttatc
cgttatggtaatcgattgttagcaaactccagtaataaacttattgattttggaagcagt
gtcagactgtttattaagcatctgtctgcagaggattttgttgtcaaagttagatctttg
caggcactagggtttgttttaattgctaggccagaatatatgttggaaagttatgttgga
aaaatactggaggaaatattatcctctgctgctgatactcgccttaagattcaaggatta
caaaacatgtacgagtatcttctggatgctgaaagccgaatgggaactgataaagatgat
gataacgttgctggttacacagtaggagctggacagagtgtacctgttgctgctggtgct
ggtgatacaaacatatgtgggggtatagttcagttatattgggataatattttgggcaga
tgtttggatttcaatgaacaagttcgtcaatcagccctgaagattgttgaaattgtgctg
cgtcaaggtcttgttcatccaatcacctgtgttccgtacctaatagcacttgaaacagat
cctctggagtcaaattcaaagttggctcatcatctcctgatgaacatgaatgaaaagtat
cctgcattttttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaa
tctatctgtggtggttctgaaaatgttgacactaagatccaatctaagatgcctatttct
ggaaaagggaagcctgaggctgggccgcttgctcaagctaaacttggggtttctcgaata
tacaagctcatccgagggaaccgggtttcaaggaacaaatttttgtcctcaattgtgagg
aaatttgataatccaagatggaataaattagtaattgcttttttaacatactgtacggaa
gtccttgctttgttgccattcatttcacctgatgagcccctttatttaatctatgccatc
aatcgaatagttcaagtgagggccggaccgctagaggcgaattttaaagcctggagttca
agcatttcaaatcacggtacaccttatggaaatggaatgcatcaacaggcgccagaagag
tctactgttacaacccaagcaatgtcagtggatttgaatggatcaattcaacaaaatata
tatgctcatctcaattccaatgacttgagatccctggatttaaatggatcaaatcaccag
caggtagattattcttatacgggtagccctgaaacaaagccgcatgctacgggttacaca
gattttaacttctcaaaagatgatctagagaaagttcaggccgactgtttatcagcaatt
gcattgcagcttcttttaaagctcaagagacacctaaaaatcatgtatagtctcgacgat
gcccgttgtcaggcatattctcctactgaactaccaaaacctggagaggttatctccaga
cagaatatagcctttagtttaggtgaatcccaattcagtttgcctacgactccgcaagaa
ttggtaccgagatatcaggaatttaagcatgctttgagagaagacactgttgattattca
cactacactgcaaatataaaacgtaagagacctaccactactccaaggaaagttcaagct
cggaaagctgtacatgtgtcaagtgggaactacaacgaggaatatgatgatgattatagc
ggtggaagtgcgatgcgcaatatatcatttagtggcagccgcaggagtagccttagaagc
tctaggcaatattga
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integrated database retrieval system
